Oncorhynchus tshawytscha (Chinook salmon): 112231408
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Entry
112231408 CDS
T05605
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112231408
03036 Chromosome and associated proteins [BR:
otw03036
]
112231408
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112231408
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112231408
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112231408
microRNA pathway
RISC loading complex
112231408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
112231408
NCBI-ProteinID:
XP_042168381
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Position
LG03:complement(22557694..22579046)
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AA seq
871 aa
AA seq
DB search
MEPGPSGAVPMGPFPPPLQQVFQAPRRPGMGTVGKPIKLLANYFEVEIPKMDVFHYEVDI
KPDKCPRRVNREVVEYMVQHFKPQLFGDRKPVYDGKKNIYTVLALPIGSEKVDFEVTIPG
EGKDRIFKVSIRFLATVSWRLLQETLVSGRLQVPLDSVQALDVAMRHLASMRYTPVGRSF
FSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIR
NIDEQPKTLTDSQRVRFTKEIKGGPLNSDRWALPGLKVEVTHCGQMKRKYRVCNVTRRPA
SHQTFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAG
QRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNANFNLDPYIQEFGIKVKDEMAEVT
GRVLPAPILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKN
FTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVY
AEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQE
PVIFLGADVTHPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVREL
LIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQK
RHHTRLFCADKSERIGKSGNIPAGTTVDTSITHPFEFDFYLCSHAGIQGTSRPSHYYVLW
DDNRFTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSSGEGS
HVSGQSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggaccgtctggcgctgtgcccatggggcccttccccccacccctgcagcag
gtgttccaggcaccccgccggccgggcatgggcacggtgggcaagcccatcaagctgctg
gccaactactttgaggtggagatccccaagatggacgtgttccactacgaggtggacatc
aagcctgacaagtgcccccgacgggtcaacagggaagtggtggaatacatggtgcagcac
ttcaagccccagctctttggcgacaggaagccggtgtacgacggcaagaagaatatctat
acggtgctagcactccctatcggaagtgagaaggtggactttgaggtgactatccccggg
gaggggaaggatcgtatcttcaaggtgtctatccgcttcctggccacggtgtcatggcgt
ctgctccaggagacactggtcagcgggcgcctgcaggttcccctggactctgtccaagcc
ctggatgtggccatgcgccacctagcctcaatgaggtacactccggtgggacgatcattc
ttctccccacctgaaggatactaccatcccctgggaggggggagagaggtgtggtttggt
ttccaccagtctgtacgccccgccatgtggaaaatgatgctcaatattgatgtgtctgcc
acggccttctacaaagcccagccggtgatcgagttcatgtgcgaagtcctggacatccgc
aacatagacgagcagcccaagaccctgaccgactcgcagagggtccgcttcaccaaggag
atcaaaggtgggccgttgaacagtgatcggtgggcgttaccaggtctgaaggtggaggtg
acccactgcggtcagatgaagaggaagtaccgcgtctgcaacgtcacgcgacgccccgcc
agccaccagacatttcccctgcagcttgagagcggacagacagtagaatgtacggtggcc
cagtacttcaagcagaagtacaatctgcagctcaagtatccccacctgccctgcctccag
gtggggcaggagcagaagcacacctacctgcccctggaggtgtgtaacatagtagcaggg
cagcgctgtatcaagaaactgacagataatcagacgtccactatgatcaaagccacggct
cgctctgcacctgacagacaggaggagatcagccggctgatgaaaaatgccaactttaac
ctggacccgtacatccaggagtttgggatcaaggtgaaggatgagatggcggaggtgacg
ggaagggtgctgcctgcccctatcctacagtatggaggacggaaccgggccatcgccacg
cccaaccagggggtgtgggacatgaggggcaagcagttctacaacggtattgagatcaag
gtgtgggccatcgcctgcttcgccccccagaaacagtgtcgggaggaggtgctcaagaac
ttcacagaccagctgcgtaagatctccaaggatgctgggatgcccatccagggccagccg
tgtttctgtaaatacgcccagggagccgacagtgtggagcccatgttcaggcacctgaag
aacacctactctggactgcagctcatcatcgtcatcctgcctggaaagaccccagtctac
gcggaggtgaagagggtgggagacactctcctaggaatggccactcagtgtgtccaggtg
aagaacgtggtgaagacgtccccccagaccctctccaacctctgcctcaagatcaacgtc
aagctggggggaatcaacaatatcctggtgccccaccaacggtcagcagtgttccaggag
cctgttatcttcctgggggccgatgtaacacacccccctgctggagatgggaagaagccc
tccattaccgctgtggtaggcagtatggacgcccaccccagcaggtactgtgccacagtc
cgggtccagaggcccaggcaggagattatcgaagacctttcttacatggtgcgagagctg
ctgatccagttctacaagtcgacccgcttcaagcccaccaggatcatcttctacagggac
ggggtgcccgaggggcagctcccgcagatactccactacgagcttctggccatcagggat
gcgtgcatcaagctggagaaggactaccagcctggtatcacctacatcgtggtccagaag
cgccaccacacacgcctcttctgtgccgacaagtctgagagaatcgggaagagtggtaac
attcctgcagggaccacagtggacaccagcatcactcacccgtttgagtttgacttctac
ctttgcagtcacgcgggtatacaggggactagtcggccctctcattactacgtcctgtgg
gacgacaatcgtttcaccgccgacgagctgcaaatcctcacctaccagctgtgccacacc
tacgtgcgctgtacacgctccgtctccatccccgcgccagcctactacgcccgcctcgtg
gccttccgtgcccgctaccatctggtggacaaggagcacgacagtagtggggagggaagc
catgtctctggtcagagtaacggtcgggacccccaggctctggcgaaggcggtgcagatt
caccacgacacgctgaggaccatgtactttgcctga
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