Oncorhynchus tshawytscha (Chinook salmon): 112231427
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Entry
112231427 CDS
T05605
Symbol
cldn3c
Name
(RefSeq) claudin-3
KO
K06087
claudin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112231427 (cldn3c)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112231427 (cldn3c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112231427 (cldn3c)
04147 Exosome [BR:
otw04147
]
112231427 (cldn3c)
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112231427 (cldn3c)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112231427 (cldn3c)
Exosomal proteins of colorectal cancer cells
112231427 (cldn3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Motif
Other DBs
NCBI-GeneID:
112231427
NCBI-ProteinID:
XP_024253945
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All DBs
Position
LG33:complement(38276708..38296798)
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AA seq
381 aa
AA seq
DB search
MASFALELVGVILSVLGWILSIVSCALPMWRVTAFIGANIVTAQVYWEGLWMSCVFQSTG
QMQCKVYDSMLALPQDLQAARALTVVTIILGVIALLVATIGAKCTNCIEEEGVKAKVMVS
AGVAFILASLTQIVPVSWSAHTIIQVFYNPIIPSAQKMEIGAAMSMGMEIVGIALGVIGF
ILGIVVCALPMWKVTAFIGANIITAQTIWEGLWMNCVTQSTGQMQCKIYDSMLALPQDLQ
AARAMTVIAIVLGILGVMVSIVGAKCTNCIDDESSKAKVMIISGIFFILAGILILIPVSW
SANTIIRDFYNPLLVEAQRRELGASLYIGWGSAALLLIGGAMLCCSCPPREEKRYKPPRM
AYSAPRSVSGGAAGYDKKDYV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtttgctctggagctagtgggtgtgatcctgtcagtgctgggctggatactg
agcatagtgagctgtgctttgcccatgtggagggtcacagctttcatcggagccaacatc
gtcacagcacaggtctactgggaagggttatggatgagctgtgtgttccagagcacggga
cagatgcagtgtaaggtctacgactccatgctggccttaccccaggacctgcaggctgcc
agggctcttactgtggtcaccatcatcctgggggtcatagctctcctcgtggctaccatt
ggggctaagtgcaccaactgcatcgaggaggagggggtgaaggccaaggtgatggtgtct
gccggagtggcctttatcctggcttcgctgacccagatagtgcctgtgtcctggtcggct
cacaccatcatccaggtgttctacaaccccatcatcccctcagcacagaagatggagatc
ggggcggccatgtcgatgggcatggagattgtgggcatcgccctgggagtcataggattc
atcctgggcatcgtggtctgtgctttgcccatgtggaaggttacagccttcatcggagcc
aacatcattacagcccagaccatctgggaagggttatggatgaactgtgtgacccagagc
acgggacagatgcagtgtaagatctatgactccatgctggccttacctcaggaccttcag
gctgccagagccatgactgtcatcgccattgtcctggggattctaggggtgatggtctcc
atcgtcggagccaagtgcaccaactgcatcgatgacgaatcctccaaagctaaagtcatg
atcatctccggaatcttcttcatcctggccggtatcctcatcctcatccctgtctcctgg
tcggccaacaccatcatccgagacttctacaacccccttttggtcgaggcccagaggaga
gagctgggagcctcactctacatcggctgggggtcggcggccctgctccttattggagga
gccatgctgtgctgctcctgcccccccagggaggagaagaggtacaagcccccccgcatg
gcctactccgcacctcgcagcgtgagtgggggcgcagcgggatacgacaagaaagactac
gtctga
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