Oncorhynchus tshawytscha (Chinook salmon): 112231645
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Entry
112231645 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: teneurin-3-like
KO
K24473
teneurin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112231645
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
EGF-like domain-containing proteins
Other EGF-like domain-containing proteins
112231645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
TEN_NHL
Ten_N
EGF_Teneurin
EGF_TEN
GBD_Tenm3
Teneurin_ABD
FN-plug_TEN1-4
TTR_TEN1-4
Tox-GHH
EGF_2
RHS_repeat
NHL
EGF
CarboxypepD_reg
RHS
SBBP
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
112231645
NCBI-ProteinID:
XP_042167700
LinkDB
All DBs
Position
LG34:complement(11072108..11480195)
Genome browser
AA seq
2833 aa
AA seq
DB search
MDVKERRPYCSLTKSRRDKERRYTGSSGDSEECGSGGGGGPGPRVPTQKSYSSSETLKAF
DHQDSSRLLYSSRVKEMVHREQDEYTRQGQNFNLRQLGICEPSTRRGLAFCSEMGLPHRG
YTVGAGSDVDTENEGVMSPERAMRLWGRGVKSGGRNSCLSSRSNSALTLTDTEHENKSDS
DNGSPMPSSLPSPSVTDHSHSQPPSPNLHDNQSSLLSSASAHPAVHESDEDEEEYTATLY
LPVTQVTAHSHHGLDCNEQPPNHHQQGQSTLPPALPPHKQQPSVTALNHNSLSSRNRNPS
PAPPAALPAELQTTPESVPLQDSWVLGSNVPLESRKLAKQAVLENGHDNLIEMDVFPPAC
HEGAYGDGHFLFKTGTGTTPLFSTATPGYTMATGSVYSPPTRPLPRNTLSRSAFKFKKSS
KYCSWRCTALSAVGLSVLLSVLLCYCIAMHLFGLNWQMQETEGYTFENGQGKSDTTPNTI
TALSADNGKLGVFLQENNTIDTGEVDVGRRAVQEVPPGIFWRSQLYIDQPQFLKFNISVQ
RDALVGVYGRKGLPPSHTQYDFVELLDGSRLITKEKRGLVEVEGVSRRARSVSVHERXFI
QYLDSGIWHMAFYNDGKNSEQVSYNTIVIESVMECPHNCHGNGDCLSGTCHCFPGFLGPD
CSRASCPVLCSGNGQYSRGRCLCFSGWKGTECDVPSNQCIDIHCGGHGICIMGVCACNTR
YKGDNCEEVDCLDPGCSVHGVCIHGECHCSPGWGGTNCEILKTMCPDQCSGHGTYQSESG
TCTCDTNWTGPDCSVEVCVVDCGSHGVCFGGSCRCEEGWTGTVCDQKACHPMCTKNGVCK
EGKCECNQGWTGEHCNIAHNPDIRVKGFKEGCPGLCNNNGRCTLDQNGWHCVCQSGWRGA
GCDVAMETLCTDGKDNEGDGLVDCMDPDCCLQTSCQTQPYCRGSPDPSDIISQSPSSLMP
QHAARSFYQRIRFLVGPEGSHVITGDNPFNKSLVSIIRGQVLTADGTPLIGVNVTFVHYP
DHGYTVTRKDGMFDLLTNGGASLTLSFERAPFLIQYRTVWIPWNVFYVMDTLVMKKEEND
IPSCDLSGFIRPSPVIVASPLSTCFRSSPEDGPIIPETQVLQEETSIPGSDLNLLYLSSR
AAGYKPVLKVTMTQASVPFNLMKVHLMVAVVGRLFQKWFPAQPNLSYTFIWDKTDAYNQK
VYGLSEAVVSVGFEYESCLDLILWEKRTATLQGYELDASNMGGWTLDKHHILDIQNGILY
KGNGENVFISQQPPVISSIMGNGRRRSISCPSCNGQAEGNKLLAPVALACGADGSLFVGD
FNYIRRIFPSGNVTSVMELSNNPAHRYYLATDPVTGQLYVSDTNSRRIYRPKVLTGTKEL
IQNGEVVAGTGEQCPPFDEARCGDGGKATEALLMGPKGITVDKNGYIYFVDGTMIRKVDR
NGIISTLLGSNDLTSARPLTCDTSMHIRQVRLEWPTALAINPMDNSIYVLDNNVVLQITE
NRQVRIVAGRPMHCQVPGIEYTLGKRAVQTMLEGAAAIALSYSGVLYIAETDEKKIHRIR
QVSTDGEITPLAGALSDCDCKNDANCDCYQTGDGYAKDARLNSPSSLVVSPDGTLYVADL
GNIRIRAVRRNQPPSGSAVSGPGSFEVASPSSQELYVFDSNGTHQFTMSLVTGDYKYNFS
YSNEEDVTAVTDSSGNTLRIRRDPNRMPVRIVAPDNQVIWLTIGTNGGLKTLTAQGQELV
LFTYHGNSGLLATKTIQIGWTTFYDYDSEGRLTNVTFPTGVVTNLHGDMTGAITVDIETS
GRDEDVSITTNLSSIDSFYTLVQDQLRNSYQVGYDHSLRVIYANGMDTHYQTEPHILAGA
ANPTVARRNMTLPGENGQNLVEWRFRKEQTRGKVIVFGRKLRVNGRNLLSVDYDRTLRTE
KIYDDHRKFLLKIVYDTQGHPTLWVPSSKLLSVNLTYSSTGQVTSLQRGPTTERVEYDGQ
GRIVSRVFADGKTWSFTYLDKSMVLLLHSQRQYIFDYDLLDRLSAVTMPSVARHTMQTIR
SLGYYRNIYNPPESNASVTVDYSEDGQLLRVAHLGTGRRILYKYRRQNKMAEILYDSTRV
SFTYDETAGVLKTVNLQSEGFICSIRYRQIGPLVDRQIFRFSEDGMVNARFDYTYDNSFR
VTSMQAVINETPLPIDLYQFDDISGKVEQFGKFGVIYYDINQIISTAVMTYTKHFDVHGR
IKEIQYEIFRSLMYWITIQYDNMGRVTKREIKIGPFANTTKYGYEYDVDGQLQTVYLNEK
MMWRYNYDLNGNLHLLNPGNSARLTPLRYDLRDRITRLGDVQYRLDDDGFLRQRGAEIFE
YNSKGLLERVYSKGNSWTIQYRYDGLGRRVASRTSLGQHLQFFYADLNYPTRITHVYNHS
SSEITSLYYDLQGHLFAMEISSGEEFYIACDNTGTPLAVFSSNGLLLKQVQYTAYGEVYF
DSNPDFVLVIGFHGGLYDPLTRLLHFGDRDYDIPAGRWTTPDIGTWTRVGKDPAPFNLYM
FRNNNPVSKVHEVKEYVTDVNIWLVTFGFHLHNAIPGFPIPKFDLTQPSLEMKKSQLWDD
LPSISGVQQEVTRQAKAFLSFERMPEIQLSRRHSNREKPWLWFATAKSLIGKGVMLAVTQ
GRVVTNTLNIANEDCIKVAAVLNNAFYLEDLHFTVEGRDTHYFIKTSLPESDLGALRLTS
GRKSLENGVNVTVSQSTTVVNGRTRRFADVELQYGALALHVRYGMTLDEEKARVLEQARQ
KALSSAWSREQQRVREGEEGVRLWTEGEKRQLLSGGKVLGYDGYYVLSIEQYPELADSAN
NIQFLRQSEIGKR
NT seq
8502 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaaggaacgcaggccctactgctcgctgaccaagagcaggcgcgacaaggag
cggcgctacacgggctcgtccggcgacagcgaggagtgcggcagcggcggcggcggtggc
ccgggaccgagggtacccacccagaagtcgtacagctccagcgagacgctcaaggccttc
gaccaccaggactcctccagactattgtacagcagcagagtgaaggagatggtgcaccgt
gaacaggacgagtacacccgacaagggcagaacttcaacctgagacaactggggatctgc
gagccgtccacgcgccgcggcctggccttctgctccgagatgggcctcccccaccgcggc
tacacggtcggcgccggctccgacgtggacaccgagaacgagggcgtgatgtcaccggag
cgtgccatgcggctgtggggccgtggggtgaagtcgggcggccggaactcgtgcctgtcc
agccggtccaactcggccctgaccctcaccgacacagagcacgaaaacaagtcggacagc
gataatggttctcccatgccatcctctctacccagcccatcagttactgaccattcacac
tcgcaaccaccatcacccaatctccatgacaaccagagctcgttgctaagtagcgccagc
gcccatccggcggtccatgagtcggacgaggacgaggaagagtacacagccacgctgtac
ttacctgtaacgcaggtcacagctcacagccaccacggcctcgactgtaatgagcaaccg
cccaatcaccaccagcagggccagtccacgctgccgccagccctgcctccccacaagcag
cagccgtcggtcaccgcgctcaaccacaactccctgagcagccgtaaccgtaaccccagc
ccggccccaccggccgccctccccgccgagctgcaaaccacacccgagtccgtgccgctg
caggacagctgggtcctgggcagcaatgtgccactggagagcagaaaattagcaaagcaa
gccgttctggaaaacgggcatgacaacctgatagagatggatgtgttccctcccgcgtgc
cacgaaggtgcctatggggatgggcacttcctcttcaagacaggcaccggcacgacccct
ctgttcagcacggctactccaggttacaccatggcaacgggctccgtctactcgccgccc
acacggcccctacccagaaacaccctctcccgctctgccttcaagttcaagaagtcctcc
aagtactgctcctggagatgcactgctctcagcgccgtgggactctccgtcctgctgtct
gtcctgctctgctattgcatagccatgcatctgtttggtctgaactggcagatgcaggag
acagagggctacacctttgagaacggtcaggggaagtcagacaccacacccaacaccatc
accgcactgtctgctgataacggtaaactaggggtgttcctccaggagaacaacaccata
gacacgggggaggtggacgtggggcgcagggccgttcaggaagtcccaccagggatcttc
tggcgctcccagctctacattgaccagccccagttcctcaagttcaacatctcagtgcag
agggatgcgttggtgggggtctacggcaggaagggcctgcccccctcgcatacacagtat
gactttgtggagctgctggatggcagtcgcctgatcaccaaggagaagcgcgggctggtg
gaggtggagggcgtgtcaaggcgggcgcgctcggtgagcgtgcacgagcggngcttcatc
cagtacctggactctggcatctggcacatggccttctacaacgacgggaagaactcagaa
caggtctcctacaacaccatcgtcatagagtccgttatggagtgtccccacaattgccat
ggcaacggtgactgtctgtctggaacgtgtcattgcttcccagggttccttgggcctgat
tgctcaagagcttcgtgccccgtgctgtgcagtggtaacggccagtactccagaggtcgc
tgcctgtgcttcagtggctggaaggggaccgagtgtgacgtgcccagcaaccagtgtata
gacatccactgtggaggacacggcatctgtatcatgggcgtctgtgcctgcaacaccaga
tacaagggagacaactgtgaagaagtggactgcctggaccctggctgttcagtccatggt
gtgtgtatccacggggagtgccactgtagcccgggctgggggggcaccaactgtgagatc
ctcaagaccatgtgccccgaccagtgctccggccacggcacctaccagagcgaaagcggc
acttgcacctgcgacaccaactggaccggccccgactgctccgttgaggtgtgtgtggtg
gactgcggctcccacggcgtgtgtttcgggggcagctgtcgttgcgaggagggctggacg
ggtacagtctgtgaccagaaggcctgccaccccatgtgcactaagaacggagtctgcaag
gagggcaagtgtgagtgcaaccagggctggaccggagagcactgcaacatcgctcacaat
ccggatattagagtcaaaggatttaaagagggctgcccaggcctgtgtaacaacaacggt
cgttgtaccctggaccagaacggatggcactgcgtctgccagtccgggtggcgtggggcg
ggatgcgacgtcgccatggagaccctctgcaccgacggcaaggataacgaaggagatggc
ctggttgactgtatggacccagactgttgcctccagacatcctgtcagacccagccgtac
tgccgcggctccccggacccctctgacatcatcagtcagagcccgtccagcctgatgccc
cagcatgccgcacgctccttctaccaacgcatccgcttcctggttggaccagagggcagc
cacgtcatcaccggggacaaccccttcaacaagagcctggtgtccatcatcagaggccaa
gtcctgacggcagacggaacccccctcataggagtcaatgttaccttcgtccactacccc
gaccacggatacaccgtcacgcgcaaggacggcatgtttgacctgttgaccaacggtggg
gccagtctgaccctgagtttcgagcgggctccgttcctgatacagtaccgcaccgtgtgg
atcccctggaatgtcttctatgtcatggacaccctggtcatgaagaaggaggagaatgac
atccccagctgtgacctgagtggtttcatcaggcccagtcctgtcatcgtggcctctccc
ctctctacctgcttcaggtcctcaccagaggatgggcccatcatacctgagacacaggtc
ctccaggaggagacgtccatcccgggcagcgacctcaacctgctgtacctgtcctcgcgg
gcggccggctacaagcctgtcctcaaggtcaccatgacacaggccagtgtgcccttcaac
ctcatgaaggtgcacctgatggtggcggtggtggggcgtctgttccagaagtggttccct
gcccagcccaacctctcctacaccttcatctgggacaagacagacgcttacaaccagaag
gtctacggcttgtctgaggcagtcgtgtccgtgggttttgagtacgagtcgtgtctggac
ctgatcctatgggagaagaggacagccacactgcagggctatgagctcgacgcgtccaac
atgggaggctggacgctggacaaacaccatatactggatatccagaacggcatcctgtac
aagggcaacggggagaacgtgttcatctcccagcagcccccagtgatcagcagcatcatg
ggtaacggccggcgccgcagcatctcgtgccccagctgtaacggccaggcggagggcaac
aagctgctggcccccgtggcgctggcctgtggcgccgacgggagcctcttcgtcggggac
ttcaactacatcagacgcatcttcccctctgggaacgtcactagtgtcatggagctcagc
aacaacccggcccaccggtactacctggcgacggacccggttacggggcagctgtacgtg
tcagacaccaactcccgccgtatctaccgtcccaaggtcctgacgggcaccaaggagctg
atccagaacggagaggtggtggcgggtaccggggagcagtgtccccccttcgacgaggca
cgctgcggggacgggggcaaggccacagaggccctcctcatgggacccaaaggtattacg
gtagataagaacgggtacatctacttcgtagacggaaccatgatcaggaaagtggatcgt
aacgggatcatctccaccctgttgggctccaacgacctcacctcagcacgacccctgacc
tgtgacaccagcatgcacatcagacaggttcgtctggagtggcccacagctctggccatc
aaccccatggataattccatctatgtcctggacaacaacgtggtgctgcagatcactgag
aacagacaggtgcgcatcgtggcgggacgccccatgcactgccaggtgccgggtatagaa
tacacgctgggcaagcgggcggtgcagaccatgctggagggagctgccgccatcgccctc
tcctacagtggcgtgctctacatcgccgagacggatgagaagaagatacaccgcatccgc
caggtgtccacggacggcgagatcacacccttggccggagctctgtccgactgcgactgc
aagaacgacgccaactgcgactgctaccagacgggcgacggctacgccaaagacgcccgc
ctcaactcgccctcctcgctggtcgtctcgcccgacggtacgctctacgtggccgacctg
ggcaacatccgcatccgcgccgtccgccgcaaccaaccgccgtcgggctccgccgtctcc
ggcccgggctccttcgaggtggcctcgccgtcgtcccaggagctctacgtgtttgattcc
aacggaacccaccagttcaccatgtctctcgtcactggggactacaagtacaacttcagc
tatagcaacgaggaggacgttacagcggtgacggatagtagtggcaacaccttgaggatc
cgccgcgaccccaaccggatgccggtgcggatcgttgccccggacaaccaggtgatctgg
ctgacaatcgggaccaatggcgggttgaagacactgacggcccagggacaggagctggtg
ctgttcacctaccacggcaacagtgggctgctcgccaccaagaccatacagataggatgg
accaccttctatgattatgacagtgaaggtcgtctaaccaacgtgacgttccctacgggg
gtggtaaccaacctgcacggggacatgaccggggccatcacggtggacattgagacgtcc
ggccgcgacgaggacgtcagcatcaccactaacctctcctccatcgactccttctacact
ctggtccaggaccaactaaggaacagctaccaggtgggatacgaccactctctgagggtg
atctatgccaacgggatggacacacactaccagacggagccccacatcctggcgggcgct
gccaaccccacggtggcacgcaggaacatgacgctgcccggggagaacgggcagaacctg
gtggagtggcgcttccgcaaagagcagacccgggggaaagtcatcgtgttcgggaggaag
ctcagggtgaacggcagaaaccttctctcggtggattacgaccgaactctccggacagaa
aagatctacgacgaccacaggaagttcctgctgaagatcgtgtatgacacccagggccac
cctactctgtgggtccccagcagtaagctgctgtcagtcaaccttacctactccagcacg
gggcaggtgaccagcctacagaggggtcccaccacagagagggtggagtacgatggtcaa
gggaggattgtgtcccgagtgttcgccgatggaaagacctggagttttacatacctggat
aagtccatggtgctcctgctccacagccagcgtcagtacatctttgactacgacctgttg
gaccgcctgtctgctgtcaccatgccttcggtggcccgtcacaccatgcagaccatccgc
tccctgggctactatcgcaacatttacaaccccccggagagcaacgcttcggtcaccgtc
gactacagcgaagacggacagctcctcagagtggcccacctagggacaggtcgtagaatt
ctctacaagtaccgacgacagaacaaaatggcggagatcttgtatgattctacgagggtt
agcttcacctacgacgagacagccggtgtgctgaagacggtgaacctccagagcgaaggg
ttcatctgttccatccggtaccggcagattggaccgttggtggaccggcagatcttccgg
ttcagtgaggacggcatggtgaacgcacggtttgattatacctacgacaacagcttccgg
gtcaccagcatgcaggctgtcatcaacgagacgccactgcccatcgacctctaccagttt
gacgacatctccgggaaggtggaacaattcggaaagttcggtgtgatctactacgacatc
aaccagatcatctccacagccgtcatgacctacaccaagcactttgacgtccacgggcgg
atcaaggagatccagtacgagatcttcagatccctcatgtactggatcaccatccagtat
gacaacatgggccgggtaaccaaacgcgagatcaagatcggaccgttcgccaacacgacc
aagtatggttacgagtacgacgtggacggtcagctccagacggtctacctcaacgagaag
atgatgtggcgctacaactacgacctgaacggcaacctccacctgctcaacccgggtaac
agcgcccggctcaccccgctacgctacgacctccgagaccgcatcacgcggctcggggac
gttcagtaccggttggacgatgacgggttcctgagacagagaggagctgagatctttgag
tacaactccaagggccttctagaacgcgtctacagcaaaggcaacagttggaccatccag
taccgctatgacgggttgggccgtcgtgtggcctccagaaccagcctaggccagcacctg
cagttcttctatgcagacctgaactacccgaccaggatcactcacgtctacaaccacagc
agctcagagatcacatctctctactacgacctgcagggacacctcttcgccatggagatc
agtagcggagaggagttctatatcgcctgtgacaacaccggaacccctctagcagtgttc
agtagtaatgggcttcttctgaagcaggtgcagtacacagcctacggcgaggtctacttt
gactccaaccctgactttgtcctggtgatcggcttccacgggggtctctacgatcccttg
acgcgcctgctgcatttcggcgaccgggactatgacatcccggcggggcgctggaccacc
ccagacatcgggacgtggacgagagtcgggaaagacccggcgccgttcaacctgtacatg
ttccggaacaacaaccctgtcagcaaagttcacgaggtcaaggagtacgtcacagatgtc
aatatctggctggtgacgtttgggttccaccttcacaatgccatccccgggttccccatc
cccaagtttgacctcacacagccgtccctggagatgaagaagagccagctctgggacgac
ctgccatccatctcgggggtgcaacaggaagtgacccggcaagccaaggctttcctgtcc
tttgagaggatgccggagatccagctgagccgccggcactccaaccgggagaaaccctgg
ctgtggtttgccacagccaagtcgctgatcggtaagggtgtcatgttggcggtgacgcag
ggccgtgtggtcaccaacactctgaatatcgccaacgaggactgcatcaaggtcgccgcc
gtcctcaacaatgcgttctacctcgaggacctacacttcacggtggagggacgcgacacg
cactacttcatcaagaccagcctcccggagagcgacctgggagcgctgaggctgacaagc
gggaggaagtcgctggagaacggagtcaacgtgactgtgtcccagtccaccaccgtggtg
aacggcaggactcggcgcttcgccgatgtggagctgcagtatggcgcactggcgctccac
gtgcgttacggcatgactctggacgaggagaaggcgcgtgttctggagcaggccaggcag
aaggcgttgtcgagtgcttggtccagggagcaacaacgggtgagggagggggaggaggga
gtgaggctgtggacggagggggagaagaggcagctgctgagcggagggaaggtgctgggc
tacgatgggtactacgtcctctccatagagcagtaccccgagctagcagactccgctaac
aacatccagttcctcaggcagagcgaaatagggaagaggtaa
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integrated database retrieval system
