Oncorhynchus tshawytscha (Chinook salmon): 112231711
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Entry
112231711 CDS
T05605
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
112231711
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_14
LRR_LRWD1
LRR_EndoS
LRRNT
CAS_CSE1
Sigma_reg_N
HemY_N
EphA2_TM
EIF_2_alpha
Motif
Other DBs
NCBI-GeneID:
112231711
NCBI-ProteinID:
XP_024254204
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Position
LG34:2936791..2940475
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AA seq
527 aa
AA seq
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MDFLLIGLYLKWPLRKPPGLILLLWCSLGIMLKMVPSVEGVCPRLCRCDSKLLYCEGLNL
TDVPRNLSSALGLSMRENNLTELREGHFAGLSQLTWLYLDHNNIDVVEEGTFDRLRRVKE
LDLSTNHIESLPNGTFRPLPNLRILDLSYNRLQALEPDLFHGLRKLTNLHLRYNALKFVP
VRIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRT
LYMRNNRATVVVSTLDWTWPFLEKIDLSANEIAYIEPHVFESVPNLKALMLDANRLTAVE
QRILDSWSSLGSITLAGNEWECSRNVCALAQWLSAFRGQRDSQLLCSSPDVAQGEDVLDA
VYAFQLCEDGIDQATTTMGWYPGYTTKDQVRGGPTANPYDPPAAEGGAVVTNSFTVTVAN
LDDIDSTMQIHKVVTGTMALIFSFLIVVLMLYVTWKCFPAGVRQVRQCFSSHRRKQKQKQ
SMQQMATMSTPEYYVDYKPNHIEGALVIINEYGSCTCQQQPSRECEV
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttctaataggcttgtacctaaagtggcccctgaggaagccccctgggttg
atactgttgctgtggtgctcgctgggcatcatgctcaaaatggtcccatcggtggagggc
gtctgtccccgtctatgccgctgcgacagcaagctgctctactgcgaggggctcaatctc
accgacgttccacgcaacctgagcagcgcactgggcctgtccatgcgcgagaacaacctg
acggagctgcgcgagggccacttcgctggcctgtcgcagctcacctggctctacttggat
cataacaacatcgacgtggtggaggagggcaccttcgacaggctgcgccgggtcaaggag
ctcgacctgagcaccaaccatatcgagagcctgcccaacggcaccttcaggcccctcccc
aacctgcgcatcctggacctatcgtacaacaggctgcaggcgctggagcccgacctgttc
cacggcctgagaaagctaaccaatttgcatttgcgctacaacgccctcaagtttgtccca
gtgaggatcttccaggactgccggagcatgcagttcctggacctgggctacaaccagctt
cagagcctggcacggaactccttcgctgggctcttcaagctcaccgagctgcacctggag
cacaacgagctggtcaaagtcaacctggcccacttcccacgcctcatctcgctgcgcacg
ctctacatgcgcaacaaccgggctaccgttgtggtcagcaccctggactggacctggccc
ttcctggagaagattgacctgtcggccaatgagatcgcatacatcgagccacatgtcttc
gagagcgtgcccaacctcaaggccctcatgctggacgccaaccggctgacggccgtggag
cagcgcatcctggattcatggtcatccctgggcagcatcactttggcaggcaatgagtgg
gaatgcagccgcaacgtgtgcgccctggcccagtggctgagcgccttccggggccagcgg
gacagccagctactgtgttccagcccggacgtggcacagggcgaggacgtactggacgcc
gtatacgccttccagctgtgcgaggacggcatcgaccaggccaccacgactatgggatgg
taccccggctacaccaccaaggaccaggtccggggaggccccacggccaacccctatgat
cccccagccgccgagggcggcgcagtggtcaccaattccttcaccgtgaccgtggctaac
ctcgacgacatagacagcaccatgcagatccacaaggtggtgacgggcaccatggcgctc
atcttctccttcctcattgtggtgctgatgctctacgtgacctggaagtgtttcccggcg
ggcgtgcggcaggtgcgccagtgtttcagcagccatcggcgcaagcagaagcagaagcag
agcatgcagcagatggccaccatgtccacgccggagtactacgtcgactacaagcccaac
cacatcgagggggccctggtcatcatcaacgagtacggctcctgcacctgccagcagcag
ccctctcgggagtgtgaggtctga
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