Oncorhynchus tshawytscha (Chinook salmon): 112232041
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Entry
112232041 CDS
T05605
Name
(RefSeq) mothers against decapentaplegic homolog 1-like isoform X1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04081
Hormone signaling
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112232041
09133 Signaling molecules and interaction
04081 Hormone signaling
112232041
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
112232041
NCBI-ProteinID:
XP_042167793
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Position
LG34:complement(14942688..14976982)
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AA seq
481 aa
AA seq
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MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEYPFGSKQKDV
CINPYHYKRVDSPVLPPVLVPRNSEFNAKHSMLPRFRNPLHQNEPHMPQNATFPESFSQA
NTQMNFPQTQTHSPGGNSYPGSPGSGSSATFPHSPTSSDPGSPFQMPGEPPGQMPETPPP
AYLPPEERMTQDCPQPMDTNLMVPALPLEISNRPDVQPVAYEEPKHWCSIVYYELNNRVG
EAFQANSTSVLVDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVY
AECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVY
ELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSV
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacctccctgttctccttcaccagcccggccgtcaagcgcctcctcggctgg
aaacaaggagacgaagaggaaaaatgggcggagaaagccgtggacgcgctggtgaagaaa
ctgaagaagaagaagggagcaatggaggagttggagagggctctgagctgcccgggtcag
cccagtaactgtgtcaccatccctcgctccctggatggaagactccaggtgtcccacagg
aagggcttaccccatgttatctactgtagggtgtggaggtggcctgacctgcagtctcat
catgagctcaaggctctggagtgctgtgagtacccgtttggctccaagcagaaggatgtc
tgcatcaacccgtaccactacaagagagtggatagtccagtgctgcccccggtgttggtc
ccgcggaatagcgagttcaatgccaaacacagcatgctaccacgcttccgcaaccctctg
caccagaacgagccccacatgccccagaacgccaccttcccagagtccttctcccaggcg
aacacccagatgaacttcccccagacacagacacactcccctggggggaacagctacccc
ggctcccctggtagtggcagcagtgcaaccttcccccactcccccaccagctctgaccca
ggcagcccgtttcagatgccaggtgagccgccaggtcagatgccagagaccccccctcca
gcctacttgcccccagaggagcggatgactcaggactgccctcagcccatggacaccaac
ctgatggtccccgcgttgcccctggagatcagcaacaggccagatgttcagccggtggcc
tacgaggaacctaaacactggtgctctatagtgtactacgagttgaacaaccgggtgggc
gaggcattccaggccaactctaccagcgtcctggtcgacggcttcaccgacccgtccaac
aaccgcaaccgtttctgcctgggcctcctctccaacgtcaaccgcaactcaaccatagag
aacacccggcgacacattggcaaaggagtccacctgtactatgtgggtggtgaagtgtat
gctgaatgtctgagtgacagcagcatcttcgtccagagtcggaactgtaactaccatcac
ggcttccaccccaccaccgtctgtaagatccccagcggctgcagcctcaagatctttaac
aaccaggagtttgctgagctgctggcccagtccgtcaaccacgggtttgaggctgtctac
gagctgaccaagatgtgcaccatccgcatgagcttcgtcaagggctggggtgcagagtac
caccgccaagacgtgaccagcaccccctgctggattgagatccacctgcacggtcctctg
cagtggctggacaaggtgctaacccagatgggctccccccacaaccccatctcctctgtg
tcctag
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