Oncorhynchus tshawytscha (Chinook salmon): 112232053
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Entry
112232053 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 9
KO
K19951
TBC1 domain family member 8/9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112232053
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112232053
Endosome - Golgi transport
Rab GTPases and associated proteins
112232053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
112232053
NCBI-ProteinID:
XP_042185551
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All DBs
Position
LG11:complement(15451..43939)
Genome browser
AA seq
1289 aa
AA seq
DB search
MWVHPEEVLQAGALWITERANPYFILQKRKGHGDGRGGLAGLLVGTLDVVLDSSARVAPY
RILYQTPDSLIYWIIAHGCSRKEITEHWEWLEQNLLQTLSIFENENDITTFVKGKVQGII
AEYNKNHDVKEDDDTDKFKEAICTFRKLFGMPEEEKLVNYYSCSYWKGHVPRQGWLYLSI
NHICFYSYLLGKEAKLVIRWADITQLEKSATLLLPDAVKVSTRVAEHVFSVFLNINETFK
LMEQLANIAMRQLLDNEGFEQDRSLPKLKRKTPKKVSALKRDLDARAKSERYRALFRLPK
DEKLDGHTGCTLWTPFNKMHILGQMFVSTNYICFTSKEETLCSLIIPLREVTIVEKADSS
XLFPSPVSISTKNRMTFLFANLKDRDFLVQRISDFLQQTTSKIYFERETTGSVNSSDDEV
YSQQGSLLSSSPQRSSLGSEGSSEGERQFNLNDNSVPTATQALMTMYPPPPEEFNPKLAK
EFLKEQAWKNHITEYGQGVCMYRTEKTKDLVLKGIPENMRGELWLLFSGAINEMATHPGY
YEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQ
AMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELAREYVPELY
DCMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALSVLHANIHQL
LGAKDDGEAMTVLGRYLDSVSNKDSTLPPIPHLHSLLTDDGDPHPEVDIFKLVRSSYEKF
GSIRADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIVTETAFSIDELEELYVLFKAEHLTS
CYWGGTGGSNPTERHDPSLPYLEQYRIDLEQFRGLFSLLFPWAPVNGAHADPLALRFFRL
LDHNGDSLINFREFISGLSVLCHGDLTEKLKLLYKMHVIPEVTHEQEPDSAFEATQYFFE
DITPETSNGLDPKCKSEKDDGFVRVTFKTEKVKKLHTPDYRHYLRLWNQGTKNKLDNMKD
LPKLNQSQFIELCKTLYNMFSEDAQEQELYHATATVTSLLLEMGEVGKLFCHSKDQEEQD
QDDPEEAKSSWPARDGGTKPGGVFQQRGQGEGKEESQARPCGPAKRDGRGEQLSAMEDIK
LEDSSPKDTGTSSSMLISDDETKDDTSMSSYSVLSGGSHELDDKLHCEDINDDTVLVRSE
NRPHGGGNGPHGEGGPHGRNGGLPHSTSIDKDWAITFEQFLASVLTEQALVLYFEKPVEV
AARITNAKNVRKVGCSLLSASDYEISLSG
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgcaccctgaagaggtgttgcaggcgggtgcgttgtggataaccgagcgagca
aatccgtatttcatcctccagaaacgcaagggccacggggacggcagaggaggactagcg
ggtctgttggtgggaacactggacgtggtgctggactccagtgctcgagtggccccctac
agaatcctttaccagacacctgactccctaatctactggatcattgctcatgggtgctcc
cgtaaggagatcacagagcactgggagtggctggagcagaacctcctgcagacactgtcc
atctttgagaacgagaatgacatcactacctttgtcaagggcaaagttcagggtattatc
gccgagtacaacaagaaccacgatgtgaaggaggacgatgacactgacaaattcaaggag
gccatctgtacgttccgtaagctgtttggcatgcctgaagaggagaagctggtcaactac
tactcatgtagctactggaagggccatgtgccccggcagggctggctctacctcagcatc
aaccacatctgcttctactcttacctgctggggaaagaagccaagctggtgatccgctgg
gccgacatcacccagctggagaaaagcgccacgctcctcctccccgatgcagtcaaggtg
agcacgcgggtggctgagcacgtcttctcggtcttcctcaacatcaacgagaccttcaag
ctgatggagcaactggccaacatcgccatgagacagctccttgacaacgagggctttgag
caggaccgctctctgcccaaactcaagaggaagacacccaaaaaggtgtctgccctcaag
agggacctggatgccagggctaagagcgagcgttaccgggccttgttccgtctgcccaag
gatgagaagctggacggacacacgggctgcaccctttggacccccttcaacaagatgcac
atcctgggccagatgtttgtctccactaactacatctgcttcacttccaaggaggagacc
ctgtgcagcctcatcatccccctaagagaggtgacgatagtggagaaggcagacagctcc
naacttttccccagcccagtgtccatcagcaccaagaacaggatgaccttcctgttcgcc
aacctcaaggaccgggacttcctggtccagaggatctctgacttcctgcagcagaccacc
tccaagatctacttcgagagggagaccaccgggagtgtgaacagctccgacgatgaggtg
tactcccagcagggctctctcctctccagcagtccccaacgcagcagtctgggctcagag
ggctcctccgagggtgagcgccagtttaacctcaatgacaacagcgtgcccactgccacc
caggccctcatgaccatgtacccgccgccgccggaggagttcaaccccaaactggccaag
gagttcctgaaggaacaggcgtggaagaaccacatcactgagtacggccagggggtgtgt
atgtaccgtacagagaagaccaaggacctggtgcttaaaggcatcccagagaacatgagg
ggagagctgtggctgctcttctccggggcgatcaacgagatggcgacccaccctggctac
tatgaggacctggtagagaagtctatggggaagtacaacctggccacggaggagatcgag
agagacctgcaccgctccctccctgaacacccagccttccagaacgagatggggatcgct
gccctacgaagggtccttactgcctacgccttcagaaaccccaacataggctactgccag
gccatgaacattgtgacgtcggtgctgctgctgtatgctaaagaggaggaggccttctgg
ctgctggtggctctgtgtgagcgaatgctgcctgactactacaacaccagggtcgtagga
gctctggtagaccagggtgtttttgaggagctggccagggagtacgtccctgaactctac
gactgcatgcaggacctgggagtcatctctaccatttccctctcctggttcctcaccctg
ttcctcagtgtcatgcccttcgagagtgccgtggtggtggtcgactgcttcttctacgag
ggcatcaaggtcatcttccagctggcgctcagcgtgctgcacgccaacatccaccaactg
ctgggggccaaggacgatggagaggccatgaccgtgctgggaaggtacctggacagcgtg
tccaataaggacagcaccctgcctcccatcccccacctgcactccctgctgacagacgat
ggggatccccacccggaggtggacatcttcaagctggtccgcagctcctacgagaagttt
ggctccatccgggcagacgtgatcgagcagatgcgcttcaaacagaggctaagggtcatc
cagaccatcgaggacaccaccaaacgcaacgtggtcagaaccattgtcacggagactgcc
ttcagcatcgacgaactggaggagctctatgttctgttcaaggcggaacacctgaccagc
tgctattggggcggaacgggtggcagcaaccccacggagcgccacgaccccagcctgccc
tacctggagcagtaccgcatcgacctggagcagttcagggggctgttctccctgctcttc
ccctgggcccctgtcaacggggcccacgcagaccccctggccctgcgcttcttcaggctc
ctggaccataacggagactctctgattaatttccgggagtttattagtggactgagtgtt
ttatgccatggggatctgactgagaaactgaagctcctgtacaagatgcatgtgattcct
gaggtgacccatgagcaggaaccagactctgccttcgaggccacccagtacttctttgag
gacatcaccccggaaacttccaatggccttgaccccaagtgcaagagcgagaaggatgat
ggctttgtcagggtcacgttcaagactgagaaagtgaagaaactgcacacccctgactac
cgccactacctgaggctgtggaaccagggcaccaagaacaaactggacaacatgaaggat
ctgcccaaactcaaccagagccagttcatagagctgtgcaagacactgtacaacatgttc
agcgaggacgcccaggagcaggagctgtaccacgccacggccaccgtcaccagcctgctg
ctggaaatgggcgaggtgggcaagctcttctgccattccaaggaccaggaggagcaggac
caggatgatccagaggaggccaaaagcagttggccagcccgagatggagggaccaagcct
gggggtgtcttccagcagaggggccagggagaggggaaggaggagagccaggccaggccc
tgtggccctgcgaagagggatggcaggggcgagcagctgtctgccatggaggacattaag
ctggaggactcgtccccgaaggacacagggacatcgtcctccatgctcatctcagatgac
gagaccaaagacgacacgtccatgtcgtcctactcggtgctcagcggcggctcccatgag
ctcgacgacaagcttcactgcgaggacattaatgacgacacggtcctggtgcgcagcgag
aacaggccccatgggggagggaacgggcctcacggtgaaggtgggccccatggtagaaat
ggggggctgcctcacagcaccagcatagataaagactgggccatcacctttgagcagttc
ctggcatcggtgctcactgagcaggccctggtgctttacttcgagaagccagtggaggtg
gccgcacgtatcaccaatgccaagaatgtgaggaaagtggggtgctccctactgtccgct
agcgactatgagatctccctgtctgggtaa
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