Oncorhynchus tshawytscha (Chinook salmon): 112232183
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Entry
112232183 CDS
T05605
Name
(RefSeq) deoxycytidylate deaminase isoform X1
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00240
Pyrimidine metabolism
otw01100
Metabolic pathways
otw01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
112232183
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
otw02044
]
112232183
Enzymes [BR:
otw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
112232183
Secretion system [BR:
otw02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
112232183
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC_N
Motif
Other DBs
NCBI-GeneID:
112232183
NCBI-ProteinID:
XP_042185643
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All DBs
Position
LG11:complement(4660182..4730482)
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AA seq
195 aa
AA seq
DB search
MSQEMKNEATQLNGTPASGSAQMKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVN
RENKIVGIGYNGMPNGCDDDLLPWSCSANDSLDTKYPYVCHAELNAIMNKNSADVKGCSM
YVALFPCNECAKLIIQAGIKDVIYLSDKYHDIPEMTASRRLLNLAGIQYKQFKPKRNKIV
IDFHSINTGMFNGTG
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagaaatgaagaacgaggcaacccaactgaatgggaccccggcctctggttcc
gctcagatgaaaaagcgcgaggactacctggagtggcctgaatatttcatggctgtagct
ttcctgtcagctcagagaagcaaggatcccagctcacaggttggagcatgtattgttaac
cgggagaataagatagtgggcatcggctacaacggcatgcccaacggctgtgatgatgac
ctgctgccctggtcctgctctgccaacgacagcctggataccaaatatccctacgtgtgc
catgcggagctgaatgcgatcatgaataagaactcagcggacgtgaagggctgttccatg
tacgtggctctgttcccctgcaacgagtgtgccaagctcatcatccaagcaggtataaag
gacgtgatttatttgtccgacaagtaccacgacatccctgaaatgactgcctccagaagg
ctgcttaacttggcagggatccaatacaagcagttcaagcccaagcgaaacaagattgtc
atcgattttcattctattaacactgggatgttcaacggaacaggctga
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