Oncorhynchus tshawytscha (Chinook salmon): 112232287
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Entry
112232287 CDS
T05605
Name
(RefSeq) transcription factor E2F8
KO
K09391
transcription factor E2F7/8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112232287
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
112232287
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Gene cluster
GFIT
Motif
Pfam:
E2F_TDP
TrmB
Motif
Other DBs
NCBI-GeneID:
112232287
NCBI-ProteinID:
XP_024254978
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All DBs
Position
LG12:55256031..55267981
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AA seq
926 aa
AA seq
DB search
MSSTLPESQNLSHKTQTTTSNHKGNVFAEPQALTTTPRKVSTQGTVLTEIQSNMGPLTTP
TKGKETGPSEPWTPTSNLKMLISAASPEIRNREKELCMDPEGGDAMDPELGEEGEKQISR
KEKSLGLLCHKFLARYPDYPNPALNNDISLDDVAAELNVERRRIYDIMNVLESLHIVSRL
AKNRYTWHGRANLPQTLAKLRQVGEEHRYGQQMQQIRQRSLEREFDSDGDEKENEEVGEV
EGGGGGQKEMFFVELPGMEFKAASVNSRKDKSLRVMSQKFVMLFLVSTPRVVSLEVAARI
LIGEDQVADQDKGKFKTKVRRLYDIANVLRSLKLIEKVHVTEERGRKPAFEWTGPEDFPS
VKETAATTATAKRTLESRTSIDNCAKNLFSSPGSKHSFTRHPSLIKLAKSIQEDRRKINS
APTSPVKNDSSSSEFFPTKMAQLAAICKIQLDQQSNKVVDRTPKPAVTVTETVPDHEQKA
SKNPGAPQPPVLTPTEPRAITVHLTPQAQFTPQPTGAMSFHPAQCSPLIPVLLPQLQGGG
PYAIYMHHSFRPHPLTRPQPTSLAVRSMTFEDKTGRSPSDATVHSHSPATNNLPTSSPSV
LKRVCSKRPSEESPSKAKKIDPSTRDTSPKLCEILQARLKARRGELLSNRPSPRALHLDP
EFVNTPGSSVAAAANQTLEQNLETFLGEKVATSDSEAGLTPIRAVPLTPHHLHTETLIPT
GYLIPISQQSPFSYKDIHNPESSKASTPTYIYHTPTAGSRLPPTQELTPTSLSLHRPPPA
SPFSAQGHRFHSPSPAILNFTLQNLGLIPGPGSVPACSPGTVQTPEHPSSVPLPQRGSMV
FVKPMSPVPVQHQMTGPDGQPLTLISLQQVTTPKGTALTQHSFFHTPVSLSPLATVVTSS
HGHTAPAGAKTVYIPQRKLEVTTEDT
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcactttacccgaatcacagaatctgagccataaaacacaaaccaccacctct
aatcacaagggtaatgtctttgcagagccacaagcactgacaacaacaccaaggaaagta
tctacccaaggcactgtgctaacagagattcaatccaacatgggaccccttacgacccca
actaaaggaaaggaaactggacctagtgagccttggactccaacctccaatttgaaaatg
ctgatcagcgctgccagccctgagatcaggaacagagagaaagagctgtgtatggaccct
gagggaggggatgccatggaccctgagcttggagaggaaggggagaaacaaatcagcaga
aaagagaagagtcttggtttgctctgtcacaagttccttgcccgctaccccgattacccc
aaccctgcactcaacaacgacatcagtctggatgatgttgctgcagagcttaacgtggag
cgcaggcgcatctatgacatcatgaatgtgctggagagcctgcacattgtcagccggcta
gcaaagaatcgctacacatggcacggacgcgctaacctgccacagaccctggccaagttg
cggcaggtgggcgaggagcaccgctacgggcaacagatgcagcagatccgccagcgcagc
ctggaaagggagtttgactcagacggcgacgagaaggagaatgaggaggtgggggaagtg
gagggaggaggagggggccagaaggagatgttctttgtggagcttcctgggatggagttt
aaagcagcctcagtgaacagcaggaaggacaagtctctgagggtgatgagccagaagttt
gtcatgttgttcctggtgtccacgcctcgggtggtcagtttggaggtggctgctaggatc
ctcattggagaggaccaggtggctgatcaggacaagggcaagttcaagactaaggtccgc
aggctgtatgatatagccaacgtgctgcggagcctgaagctgatagagaaggtccacgtg
acagaggaaagagggaggaagccagcctttgaatggaccggccctgaggacttccccagt
gtgaaggagaccgctgccactacagccactgccaagaggacacttgagtctcgtacctcc
atagacaactgtgccaaaaatctcttttcctctccggggagcaaacacagcttcacccgc
cacccctccctcatcaaactggccaagagcatccaggaagaccgacgcaagatcaactcg
gcccccaccagccctgtcaagaatgattcctcgagcagcgagttctttcccaccaaaatg
gcccaactagcggcaatctgtaagatccagcttgaccagcaatcaaacaaggttgttgac
aggacacctaagcctgcagttactgtgactgagacagtgccagatcatgaacagaaagct
tctaaaaatccaggagctccccagccaccagtattaacacccacagaaccccgtgccatc
actgtccacctcaccccacaggcacagttcaccccccaacctactggggcaatgtccttc
caccctgcccagtgttcacccctcatccctgtgctgctgccccaactccagggaggtgga
ccctacgccatctacatgcaccactccttcaggccacaccccctaaccaggcctcagcca
accagcctcgctgtgcgctccatgaccttcgaggataagacggggcggagcccgagtgat
gccacagtgcacagccactcgcctgctacgaacaacctgccaaccagcagcccctcggta
ctaaaacgtgtgtgttcaaagagaccctctgaggaaagcccctccaaggccaagaagatt
gaccccagcaccagggacacgtctcctaagctgtgtgagatcctccaggctcgtctgaag
gcgcgtcgcggggaactcctctccaaccgtccctcgccccgagccctccacctggaccct
gagtttgtcaacacacctgggagctccgtggccgccgcagccaatcagacactggagcag
aacctggagaccttcctgggggagaaggtcgcgacctcagacagcgaggcagggctcacg
ccgatcagagctgttccactgaccccccaccacctacacacagagactctgatccccact
ggctacctgatccccatctcccagcagtcccccttcagctacaaagacatccacaacccc
gagagcagcaaagcctccacacccacctacatctaccacacacccactgcaggctctaga
cttcccccgacccaggagttgacccccaccagcctctccctccacaggcctccccctgcc
tcgcccttctctgcccaggggcaccgcttccacagccccagccctgccattctcaacttt
accctgcagaacctgggcctcatccctgggcctggttctgtacccgcttgcagccctggc
actgtccaaaccccggagcaccccagctccgtgcccctgcctcagaggggcagcatggtc
ttcgttaagcccatgtcccccgtgccagtccaacaccagatgaccggcccagacgggcaa
ccactcacgctaatcagcctacagcaggtgaccacgcccaaagggacggccctcacccag
cacagtttcttccacacccctgtctccctctccccgctggctaccgtggtaaccagcagc
cacggacacacggcgccggcgggcgctaaaaccgtttacatccctcagaggaagctggaa
gtcaccactgaggacacctaa
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