KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112232428
Entry
112232428         CDS       T05605                                 
Name
(RefSeq) DNA repair protein complementing XP-A cells homolog
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    112232428
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:otw03400]
    112232428
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112232428
SSDB
Motif
Pfam: XPA_C XPA_N Ion_trans_N Zn_ribbon_Nudix
Other DBs
NCBI-GeneID: 112232428
NCBI-ProteinID: XP_024255209
LinkDB
Position
LG11:complement(4787348..4794526)
AA seq 274 aa
MDLLELPTPMNDHAASPPSEPKAKSCDLSPAMRAKIERNRQRAVMLRQARLANRPSAGEG
GGTSAKVAKTVDSGGGFFIEEEDEKQRKVVLQPAPVIKADYLVCDDCNKSFMDSYLSNGF
DLAVCDNCRDYEVKHKLVSRTEAKQLYLLKDCDLDQREPVLRFVLRKNPHNPHWGDIKLY
LRLQVEKRSLEVWGSEEALEEAKEAREENREVQKQKRFNKKVKELRCAVRRSMWTKGTSA
HQHEYNPEELVDEEEDLYRKVCNACGHELTYEKM
NT seq 825 nt   +upstreamnt  +downstreamnt
atggatctgttggagctccccacgccaatgaatgatcatgctgcttctcccccttcggag
cccaaagccaagagctgcgatctgtcccccgctatgagagccaagatcgaacggaacaga
cagcgggctgtgatgctgaggcaagcccgcctggccaacagaccatcggcaggagaaggg
ggtggaacctcggctaaagtcgccaagacagtcgactctggtggagggttcttcattgaa
gaagaagatgagaagcaaaggaaagtggtgcttcaaccagcccctgtgataaaggcagac
tacctggtgtgtgatgactgtaacaagtcgtttatggattcctacctcagcaacggcttc
gatctggcagtctgtgacaactgcagagactacgaggttaaacacaagctggtatcccgt
acggaggctaagcagctctacctactgaaggactgtgacctggaccagagggagccagtg
ctgaggtttgtcctgaggaagaacccacacaatcctcattggggagacatcaaactctac
ctcaggctgcaggtggagaagcgctccttagaggtgtggggctctgaggaggccctggag
gaggccaaggaagcaagagaggagaacagggaggtgcagaagcagaagcgcttcaacaaa
aaagtcaaagagctgcgttgtgcggtgaggagaagcatgtggaccaagggaaccagtgct
caccagcacgagtacaaccctgaggaactagtggatgaagaggaggatctctacaggaag
gtctgtaacgcctgtggacacgaactgacctatgagaagatgtag

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