Oncorhynchus tshawytscha (Chinook salmon): 112232500
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Entry
112232500 CDS
T05605
Name
(RefSeq) nck-associated protein 1-like isoform X1
KO
K05750
NCK-associated protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112232500
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112232500
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Gene cluster
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
112232500
NCBI-ProteinID:
XP_042180086
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Position
LG07:15867136..15925942
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AA seq
1128 aa
AA seq
DB search
MSRGALQPSQQKLAEKFTILNDRGIGMLTRIYNIKKACGDPKAKPSYLVDKNLESVVKFI
VRKFPAIETRNNNQQLTQLQKEKSEILKNLSLYYFTFVDVMEFKDNVSELLNTIDACQVF
FDVTVNFDLTKNYLDLVVTYTTLMMLLSRIEERKAIIGLYNYAHEMTHGASDREYPRLGQ
MIVDYENPLKKMMEEFVPHGKSLSDALISLQMVYPRRNLSADQWRNAQLLSLISAPSTML
NPAQSDTMPCEYLSLDCMEKWIVFGFVLCHAVLNTDPAALSLWKLALQSSTCLCLFRDEV
FHIHKACEDLFVNIRGYNKRLNDIKECKEQALSQAGTMHRERRKFLRSALKELATVLSDQ
PGLLGPKALFVFMALSFARDEIIWLLRHADNIQKKSTDDFIDKHVAELIFYMEELRAHIR
KYGPVMQRYYVQYLSGFDAVILNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQVEDGDM
FDFRGMRLDWFRLQAYTSVSKASLGIADHRELGKMMNTIIFHTKMVDSLVEMLVETSDIS
IFCFYSRAFEKMFQQCLELPSQSRHSISFPLLCTHFMSCTHELCPEERHHIGDRSLSLCN
MFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKLTGKKGEPEREKP
GVESMRKNRLLVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTKSI
VGMTMYNQATQEIAKPSELLTSVRSYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHG
EPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLS
ELLGPYGMKFLSESLMWHISSQVAELKKLVVDNVEVLNQMRTSFDKPEQMAALFKKLSSV
DSVLKRMTIIGVILSFRSLAQEALRDVLSFHIPFLVSSVEDFKDHIPRETDMKVAMNVYE
LSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSMPTLASNVMSQYSP
AIEGHCNNIHCLAKAVNQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETDKMTTRN
RESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSISSSA
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggggggcattgcagccgagccagcaaaagctggcagagaaatttaccatcctt
aacgacaggggaatcgggatgctcacccggatctataacatcaaaaaggcatgcggcgac
cccaaagcaaagccgtcatacctggtggacaaaaacttggagtcggtggttaagtttatc
gtacgaaaattccctgcaatagagacgcgaaacaataatcaacagcttacacagcttcaa
aaagaaaagtctgaaatactaaagaatctatctttatattacttcacatttgtggatgtc
atggaattcaaggacaatgtttctgaattgctgaacactattgacgcttgccaggttttc
tttgatgttacggttaactttgatctcaccaagaactaccttgacttggttgtcacctac
actacactaatgatgctactgtcccgtattgaagagcggaaagcaatcattggactctac
aactatgcccatgaaatgacacacggggccagtgacagggaatacccaaggctgggccaa
atgatcgtggactatgagaatcctctgaaaaagatgatggaagagtttgtccctcatggg
aagtctttgtcagacgcactcatctcgctgcagatggtctaccccaggaggaacctgtcc
gctgaccagtggaggaacgcccagcttctgagcctgattagcgcccccagtaccatgctc
aacccggcccagtcagacacaatgccctgtgaatacctctccttagactgtatggagaaa
tggattgtgttcgggttcgtcctgtgccacgcggtgctgaatactgacccagcagcgctg
agcctgtggaagctggccctccagagcagcacctgcctctgtctcttcagggatgaggtc
tttcacatccacaaggcctgtgaggacctgtttgtcaacatccgtggctacaataaacgt
ctaaatgacatcaaagaatgcaaagaacaagcactatcgcaagctgggaccatgcataga
gaaaggcgtaagtttcttaggtctgccctgaaagagttggccacagttctgtctgaccag
cctggactgctgggcccaaaggctctgtttgtgttcatggctctctctttcgcccgggat
gagatcatctggctcctccgccatgcagacaacatacagaaaaaaagcacagatgacttc
attgacaagcatgttgcagagctcatcttctacatggaggagctccgggcacacatcagg
aagtacggtcccgtaatgcaacggtactatgtgcagtacttgtccggctttgacgctgtg
attctcaatgagcttgtgcagaacctctccgtctgccctgaggatgagtccatcatcatg
tcctcctttgtgaacaccatgacctccctcagcgtgaagcaagtggaggacggagacatg
tttgatttccggggcatgaggcttgactggttccgtctgcaggcctacactagtgtgtca
aaagcctctctgggcatcgctgaccaccgtgaactgggcaagatgatgaacaccatcata
ttccacaccaagatggtggactccctggtggagatgttagtggaaacctcagacatctcc
atcttctgcttctacagccgagcatttgagaagatgtttcagcagtgtttggaactgccc
tcacagtcgcgccactccatctcattccccctgctgtgcacacacttcatgagctgcacc
catgagctctgtcccgaagagcggcatcacattggcgaccgcagtctgtcgctctgcaac
atgttcctggacgagatggccaagcaggcgcgcaacctcatcaccgacatctgcacagag
cagtgcacgctcagtgaccagctgcttcctaaacactgtgcgaaaaccatcagtcaggca
gtgaacaagaagtccaaaaagctgactgggaagaaaggtgagccggagcgagagaagccg
ggtgttgagagcatgaggaagaacaggctcctggtcaccaacctggacaagctgcacacg
gcgctgtcagagctgtgcttctccattaactacgtgcccaacatggtggtgtgggaacac
acctttaccccccgcgaatacctcacctcccacctggagatccgcttcaccaagtccatc
gtggggatgaccatgtacaaccaggccacgcaagagatcgccaagccctccgagctgctc
accagcgtgcgttcctacatgacggtgctgcagtccatcgagaactatgtgcagattgac
atcacgcgggtgttcaacaacgtgctgctgcagcagacccagcacctggacagccatggg
gagcccaccatcaccagcctctacaccaactggtatctggagaccttgctccggcaggta
agtaacggccacattgcctacttccctgccatgaaggcctttgtcaaccttcctacggag
aacgagctcacctttaatgctgaggagtactccgatatatccgagatgaggtcactctca
gagctgctgggaccctatggcatgaagttcctcagcgagagcctcatgtggcacatatcc
tcccaggtggcagaactcaagaaactggtggtggacaacgtggaagttctgaaccagatg
aggaccagctttgataagccagagcagatggctgccctctttaaaaagctctcatctgtt
gacagcgtcctgaaaaggatgaccattattggagtcatcttgtcattccgatcactggcc
caggaagcactccgcgacgtgctgtccttccacattcctttcctggtgagctccgtcgag
gatttcaaggaccacattcccagagagactgacatgaaggtggccatgaatgtgtatgag
ctgtcgtctgcagcaggcctgccctgtgagatagacccagccttagtggtggccctttct
tcacagaaatcagaaaacataagcccagaggaggagtataagatcgcctgtctgctcatg
gtcttcgttgccgtttccatgccaactctggccagcaacgtcatgtctcaatatagccct
gcaatcgaaggacactgcaacaatattcactgtctggcgaaagctgtcaaccagatagct
gctgccttgttcaccattcacaagggaagcattgaagatcgtctcaaagaatttctggct
ctggcatcttccagcttgctgaagattggccaggagacggacaaaatgacgacacgaaac
agggagtctgtgtacctgctgctggacatgattgtacaagagtctccattcctcaccatg
gacctcctggagtcatgcttcccctacgtgctactgagaaacgcttaccacgccgtctac
aagcagagcatcagctcatctgcataa
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