Oncorhynchus tshawytscha (Chinook salmon): 112232542
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Entry
112232542 CDS
T05605
Name
(RefSeq) 5-hydroxytryptamine receptor 6-like
KO
K04162
5-hydroxytryptamine receptor 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112232542
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112232542
04082 Neuroactive ligand signaling
112232542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112232542
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Biogenic amine
Serotonin
112232542
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Motif
Pfam:
7tm_1
7tm_4
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
112232542
NCBI-ProteinID:
XP_024255345
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All DBs
Position
LG16:62155444..62167706
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AA seq
490 aa
AA seq
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MSTTAMGDSALTGLEAAGVDAVNPLGSSNGSLSTSSAWGISGSGPWLLACMLTLIILMTA
CGNTLLITLVFAQRSLRNTSNCFLVSLFLSDLMVALVVMPPAMLNVLCGAWVLSPGFCPV
WLCFDVMCCSASILNLCVISLDRYLLIISPLRYKQRMTLPRALLLVGGAWGLAALASFLP
IKMNWHSLGHRSHHFPMHWAGSANISTYPELSLRYPASYFQLSPADGLSFQCCLRVTLPF
ALVASVLTFFLPSSAICFTYCRILLVARRQARRVAALSHPPYPQHSPRGPSQPPSPGGCA
AGHAHHDREDYNQERSIPYLLLPCLSFYPQLSVNSERRLAHRQGRRAVKASLTLGVLLGL
FFSAWLPFFITNMAQAVCECVPPALFDAITWLGYCNSTMNPIIYPLFMRDFKRALGRLLP
CCSTRSPHRPSPELSLCNSGEPNLPTEPPSLASDPRQPPATATDAVNLYDAEHAGIELPL
LLPNQVDTLD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactaccgctatgggcgactctgccttaactggcttagaggcagcaggtgtggat
gctgttaaccctttagggagctccaatggcagcttgtccacgagcagtgcctggggcatc
agtggcagcggtccgtggctgttggcgtgcatgttaaccctcatcatcctgatgacggct
tgtggaaacactctgctgatcactctggtgtttgcccagcgctccttacgcaacacctcc
aactgtttcctggtgtctctcttcctgtcggacctgatggtggcgctggtggtgatgccg
ccagccatgctcaatgtgctgtgcggggcctgggtgttgtcgccgggcttttgccccgtg
tggctctgcttcgacgtcatgtgctgcagtgcctccattctcaacctgtgtgtgatcagc
ctggaccgctacctcctcatcatctcgcctctacgttacaagcagaggatgacgcttccc
cgggccctgcttctggtgggaggggcctggggtctggccgccctcgcctccttcttgccc
atcaagatgaactggcacagcttgggtcaccgaagtcaccatttcccaatgcactgggct
ggcagtgccaacatcagcacatacccagagctaagcttgcggtaccccgcttcctacttc
cagctgtcacccgctgatggcctgtccttccagtgttgtctgcgggtcaccctacccttt
gccctggtggcatccgtcctcaccttcttcctgccatccagcgctatctgcttcacctac
tgtcggattctcctggtggcacggagacaggcaaggcgagtggcggcgctaagtcaccct
ccgtacccgcaacattcgcccagagggccttctcagcctccctcaccaggtgggtgcgcc
gcgggacatgctcaccatgacagagaagactacaatcaggagcgctctattccttatctc
ttactgccctgtctgtccttctatcctcagttgtcagtgaacagcgagcggcggctggcc
cacaggcagggccggagggcagtgaaggccagtctgaccctgggagtcctgctgggcctc
ttcttcagcgcctggctacccttcttcatcaccaacatggcccaggcggtatgcgagtgt
gttcccccggcactcttcgatgccatcacttggctgggctactgtaacagcaccatgaac
cccattatctacccgctgttcatgcgtgacttcaaacgggccctggggcgactgctgccc
tgctgctctacccgctcgccccacagaccctcgccggagctctccctctgcaactctggt
gagcccaacctgcccacagagcccccctccctggcttccgatccccgacagccccccgcc
accgccacagacgccgtcaacttgtatgatgcagagcatgctgggattgagctgcccttg
ctgctgcctaatcaggtggacacgctggactga
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