Oncorhynchus tshawytscha (Chinook salmon): 112232592
Help
Entry
112232592 CDS
T05605
Name
(RefSeq) bile acid receptor isoform X1
KO
K08538
farnesoid X receptor beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112232592
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112232592
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112232592
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
112232592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112232592
NCBI-ProteinID:
XP_042155391
LinkDB
All DBs
Position
LG16:complement(61907808..61921644)
Genome browser
AA seq
483 aa
AA seq
DB search
MREWSESEMTMSAGGYLSAFDGYGISEPLQYYDVLGDPLGYSFQEPDLQGLAFSQQQYSP
VNLQFSVYEPPSSQPCHPPYTHPYSPHCLEAPCEPSPEPQCGGLGKVGGGGLPLVKRTRL
GPGGRVRGLDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGGCEMDMY
MRRKCQDCRLRKCRAVGMLDECLLTEVQCQSKRLRKGAKHRGGRPEEEENMESRSVSSTN
RLLGHVVSANLSREQNHVLDRIVEALRQYRAQYTVHCRVFEWTCTEDGGDRLMDVASPPS
QRLLQFAKSVPGFELLNCSDQSTLLSSSSVEVMFLLSAQQFTQNPAACSPALQPFNISTH
HCLKMKENIHSGTGPVNSGINEDLLGPVMNFFHSMAALGVTEAEYALLTATVLLCSADEA
SLRAVTCVESLQELILELLSRVCGAWCGAQGPQGAQRFARLLGRLTELRTLQHNHLTLLR
QQP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggagtgagtcggagatgaccatgtctgccggtggttacctctctgccttt
gatggatacggcatctctgagcctctgcagtactacgatgtgctaggggaccctttgggc
tactctttccaggagccagacctacagggcctagccttcagccaacagcagtacagcccc
gtcaacctgcaattctctgtctacgaaccaccgtcctcccagccatgccacccaccctac
acccacccctacagcccccactgcctggaggctccctgtgagcccagcccagagccccag
tgtggaggcctggggaaggtgggtggtggaggtctgcccctggtcaagaggaccaggctg
ggccctggagggcgggtgaggggcctggatgagctttgtgtggtgtgtggagacaaagcc
tctggctaccattacaatgccctcacctgtgaaggctgcaaaggttttttccgaaggagt
gtgacaaagaaagcagtgtaccggtgtaaaagtggtggaggctgtgagatggacatgtac
atgcggaggaagtgccaggactgccgcctgcgcaaatgtcgtgctgtgggcatgctagat
gaatgtctgctgacggaggtgcagtgccagtcaaagaggctgaggaagggagccaagcac
agaggcggacggcctgaggaggaggagaacatggagagcaggagcgtcagctccaccaac
aggctgcttggacatgtggtgtctgcaaatctgtcaagagaacagaatcatgtgctggac
aggatagtggaggctcttcggcagtacagggcgcagtacactgtacactgtagggtgttt
gagtggacttgtacagaggatggtggagacagactaatggacgtggcctcccctccctct
cagaggctgctgcagtttgccaagagtgtacctggctttgagctcctgaactgctcggac
cagagcaccctcctctctagttcctctgtggaagtcatgtttctgctctcagcgcagcag
ttcacccaaaacccggcagcctgtagtccagcactacagcctttcaacatctcaactcat
cattgtctgaaaatgaaggaaaacattcatagtgggactggccctgtaaactcaggaatc
aatgaggacctgctcgggccggtgatgaacttcttccacagcatggcagcattgggggtg
accgaggctgaatatgccctgctcactgctacagtactgctatgctcagcagacgaagcg
tcgctgcgggcggttacgtgtgtggaaagcttacaggagctgatcctggagctgctgtcc
agggtgtgcggagcctggtgtggagcccagggccctcagggagcccagcgcttcgcgcgc
ctgttggggagactcacggagctgcgcacgctacaacacaaccatctcaccctgctccga
cagcagccctga
DBGET
integrated database retrieval system
