Oncorhynchus tshawytscha (Chinook salmon): 112232641
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Entry
112232641 CDS
T05605
Symbol
arhgap46b
Name
(RefSeq) rho GTPase-activating protein 39 isoform X1
KO
K20649
Rho GTPase-activating protein 39
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112232641 (arhgap46b)
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112232641 (arhgap46b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGAP
MyTH4
WW
Motif
Other DBs
NCBI-GeneID:
112232641
NCBI-ProteinID:
XP_024255582
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Position
LG16:59194436..59289697
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AA seq
1127 aa
AA seq
DB search
MAPASPGSLTWRLTLELIQPWSAGEQGLRESCDWVEILEPRSQERMYVNLASGECGWEPP
PGAAVRQSDGSQWWELFDSHNNRFYYYNSASQQTVWHRPQACDIVPLAQLQAMKRSSETG
LSGPIKPQRGGGEGRRTPLPNQAYPMPPSQDPDSSGRSTPSKGLCDSLENRKDTPRDTGQ
RWQPAPGSKAAMLVKVNSIGRNQSVVPASALHLLHHNNLSPGSPAVYQVHSDRPSPAGKM
AAPVDPKQAFHLKKGDNGNFCLVMPSTGSKVHQTPQRSQAGTPRPSSPQYGATPPIYDEP
PMDPPIYDEPPMEVEGAHLLNRPFTPSTSLQRVRQPQSHPQNQPQQQPKLLQYPASHLSS
KHKRNPSATDYSPAGRECIKHMVNVDPATCKQSPLSQPVQTEQGPAPEPALPPSPSPSPA
PGAIQPRSKEVSLEKKQSWRLLEASARKNMEARHSRQNSLASQEYPAPAAVTYQDSGYST
GPSPSLRRKNRRRALGGGAGGAGQGRPGSVGSTGELSALNEKLMAEMRAVVSRSNTLRGS
KASLDTEMSEGSVPRARSPLNSLKKHGGRSASREDISASNRSLYRAGSGSNHGDVPLSPL
VSDGMVRQKRTYEKVDTLEKSITSQNSLSSPEPPMSPSQAGTLESKAQSESSSHGGGNGH
GGTRGSPHRVIVTGDRGEGRGGGKGGMGYQYPYTTLCKPPPDANMVDWASKNLNQHTQGL
FRRRVSISNMLSWNRGSIKKPMLITSDRTVKKEACEMFKLVQAYMGDRPARLERRHAALL
VVTKCWGMQGLRDELYVQLVRQTTDNLNLRSLEAGWELMAISLAFFSPSPKFRRYLEGYI
QRHLEPSNDKKIMQHIMEQQDMKNKKNSKSRKKRKQNNEEEEEEGLPISTYAKYCYRKLQ
KVAVTGVKKGLRKPTLEELDQGRKAIVTPSLFGSALEEIMERQSERFPERRLPWVQVQLS
QYVLALGGAQTEGIFRVPGDIDEVNALKLQVDQWNIPENLGDPNVPASLLKLWYRELEEP
VIPQSFYKQCISNYEDPEAAISVVQSLPELSRLVLCYFIHFLQVFAQPVNVSKTKMDVNN
LAMVMAPNCLRCQSDDPRVIFENTRKEMSFLRMLIVHLDTSFVKGII
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggccccagcttcccctggttctctgacctggaggttaaccctggagctcatccaacca
tggtcagcaggagagcaagggctcagggaaagctgtgactgggtggagatcttggagccg
cgctcgcaggagcgcatgtacgtgaacctggcctcgggggagtgtggctgggagcccccc
ccaggcgccgccgtgcgccagtccgacggcagccagtggtgggagctgtttgacagccac
aacaaccgcttctactactacaacagtgccagccagcagacggtttggcaccggccccag
gcctgcgacatcgtgcccctggcccagctacaggccatgaagaggagctcagagacgggc
ctgagcggccccatcaagccccagagagggggaggagagggccgtcgcacacccctacct
aaccaggcctaccccatgcccccctcccaggaccctgacagcagcgggaggtcgaccccg
tctaaggggctctgtgacagcctggagaacaggaaagatacccccagggacacaggtcaa
agatggcagcctgctccagggtcgaaggcagccatgttagtgaaggtgaacagcattggc
aggaaccagtccgtggtgcccgctagcgccctgcacctcctccaccacaacaacctcagc
cctggaagccctgctgtgtaccaggtccactccgacagacccagccctgcaggcaagatg
gctgcccccgtggaccccaagcaagctttccacctgaagaagggagacaatggtaacttc
tgcctggtgatgccctccactggcagcaaggtccaccagaccccccagaggtctcaggct
ggcacccccaggccctcctcgccccagtacggtgccactccacccatctatgatgaacca
cccatggatccacctatctatgatgaaccccccatggaggtggagggggcccacctcctg
aacaggcccttcaccccctccaccagcctacagagggtccgccagccccaatcccacccc
cagaaccaaccccagcagcagcccaagcttctccaatacccagcctctcacctgagctcc
aaacacaagagaaacccctccgccacagattacagccccgctggacgggagtgcatcaaa
cacatggtcaacgtggaccctgccacctgcaaacagagccccttatcccagcctgtccag
acagagcagggccctgccccagagcctgccctgcccccctctccatccccctccccagcc
ccaggtgcgatccagcccaggtccaaggaggtgagtctagagaagaagcagtcgtggcgt
ctcctggaggccagcgcgaggaagaacatggaggcccgacacagccgacagaacagcctg
gcctcccaagagtacccggcaccggcggccgttacctaccaggactcaggctactctacg
gggccctcgcccagcctgaggaggaagaaccgcaggagagctctgggcggaggggctggg
ggtgcagggcagggccggccaggctcggtgggcagcactggggagctcagtgccctgaat
gagaagctaatggcagagatgcgggcggtggtgagtcgctcaaacaccctgcgtggcagc
aaggctagcctggacacagagatgtctgaagggtctgtaccacgggcccgttcccccttg
aactccctaaagaagcacgggggtcgcagcgcctctcgggaggacatcagtgccagtaac
cgctctctgtatcgggccgggagcgggagtaaccacggcgacgtacccctctcgcccctg
gtgtcagacggcatggtgcgtcagaaacggacctatgagaaggtagacactctggagaaa
agcatcaccagccagaacagcctgtcctccccagagccccccatgtccccctcccaggca
ggaacactggaatccaaggcccagtccgagtcctcatcacacgggggaggtaatggtcac
gggggcacccggggttccccccatagagttatcgtgactggagacagaggagaaggtagg
ggaggtggaaaaggaggtatgggttaccagtacccttacaccaccctctgcaaacctcct
ccagacgccaacatggtggactgggccagtaagaacctgaaccaacacactcagggcctg
ttccgccgccgcgtctccatctccaacatgctctcctggaacaggggctccattaagaag
cccatgctgatcaccagcgaccgcacagtcaagaaggaggcctgtgagatgttcaaactg
gtccaggcctacatgggggaccgtccagcccggctggagcgccgtcacgctgccctgctg
gtggtcactaagtgctggggcatgcagggcctgagggacgagttgtacgtccagctggtc
agacagaccactgacaacctgaacctgagaagcctggaggccggctgggaactcatggcc
atcagcctggccttcttctccccctcacccaagttcagacgctacctggaggggtacatt
cagagacatctggagccctccaacgacaagaagatcatgcagcacattatggaacaacag
gacatgaagaacaagaagaattcaaagtcccggaagaagaggaagcagaacaatgaggag
gaagaagaggagggcctgccaatcagcacttatgccaagtactgctatcgcaagctgcag
aaggtcgccgtcactggggtcaaaaagggtctaaggaagcccaccctggaggagttagac
caggggaggaaagccattgtgaccccctccctgttcggcagtgctctggaggagatcatg
gagcgtcagagtgagcggttcccggagcgcaggctcccctgggtgcaggtgcagctgtcc
cagtacgtcctggccctgggaggggcccagacagagggaatcttcagggtgcctggagat
attgatgaggtgaatgcactgaagctgcaggtggatcagtggaatattccagaaaacctt
ggcgaccccaacgtcccagcgtctctgctgaagctgtggtacagggagctggaggagcca
gtcatccctcagagcttctataagcagtgcatcagtaactatgaggatccagaggcagcg
atcagtgtggtgcagtctctgcctgagttaagcaggctggtgctctgctactttatacac
ttcttacaggtgtttgcccagcccgtaaatgtgagtaagaccaagatggacgtgaacaac
ctggccatggtgatggctcccaactgtctccgctgccagtcggatgacccacgcgtcatc
tttgagaacacacggaaagaaatgtccttcttacgcatgctcattgttcacctggacacc
agctttgtcaagggcatcatctga
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