Oncorhynchus tshawytscha (Chinook salmon): 112232730
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Entry
112232730 CDS
T05605
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112232730
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112232730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112232730
04090 CD molecules [BR:
otw04090
]
112232730
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Tumor necrosis fators
112232730
CD molecules [BR:
otw04090
]
Proteins
112232730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Myf5
DUF7237
Motif
Other DBs
NCBI-GeneID:
112232730
NCBI-ProteinID:
XP_024255701
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All DBs
Position
LG08:complement(89386666..89393427)
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AA seq
247 aa
AA seq
DB search
MLYHALLLVSTLTVSFSFFLVYKVAVLEDDINKLRGDISNLKPHSKESPDGMMTGMSRTW
ERSKQVASLNSQQQRQTEKDSQTLCSSTASSLRMKREQAGCSGGTVVVQQSFLQLSANTK
EQPFVRGNVTVIPWIVALHQGEAISSTGDRIIIQQEGFFIVFGQVLFQSPGTIMGHIVRS
RGTNQRSTELLRCLQEMPQTNCANTCHTGGMVKLEREDELELVIPDRPQAQVSMDADSTF
FGIIRLN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgctgtaccatgctttactattagtctccacattaactgtgtcgtttagcttcttcctt
gtatacaaagtagcagttctagaagacgacatcaacaaactcagaggagatatttcaaac
ctaaagccacattctaaagaatccccagacgggatgatgactggcatgtccagaacatgg
gagagatcaaagcaagtggcttccctaaattcccagcaacagagacagacagagaaagac
tctcagactctgtgttcctcgacagcatcctctctgagaatgaaacgggagcaggccggc
tgtagtggaggtacagtagtagttcagcagtcgtttctgcagctgtcagccaacacaaag
gaacagccatttgtcagaggaaatgtgacagtgattccttggatagttgccttgcatcaa
ggggaggccatctcttccactggagacagaatcatcatccaacaagaaggcttcttcata
gtgtttggccaggtgttgttccaaagtccaggcaccatcatgggtcacatagtgcgtagt
cgaggaaccaatcagagatccacagagctgctccgctgtctacaggagatgccccagacc
aactgtgccaatacctgccacactggaggcatggtgaagctggagagagaagacgagttg
gagctggtgatcccagatcgaccccaagcccaggtctccatggacgcagactcaaccttc
tttggcatcatacggctgaactga
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