KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112232790
Entry
112232790         CDS       T05605                                 
Name
(RefSeq) negative elongation factor B isoform X1
  KO
K15180  negative elongation factor B
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112232790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otw03021]
    112232790
Transcription machinery [BR:otw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     112232790
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 112232790
NCBI-ProteinID: XP_024255777
LinkDB
Position
LG04:complement(21883362..21901536)
AA seq 593 aa
MLDYTIIPAMIIKYVTPPCQCIDYYLTFISLFLVCLGCVVLQTENGILLPTLQSALPFLD
LHGTPRLEFHQSVFDELCDKLMERVATIAEGKDEDRYGKLKELLEKSFPLVKMPSIQPVV
MQVLKHLPKVPEKKLKLVMADKELYKVCAVEVKRQIWQENQALFGDEVSPLLKHYIVAKE
AALFSSDLSILHNFFSPSPKARRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVH
YCTLRAELLMSLHDLDISEICSVDSCHKFTWCLDACIREKFVDAKRARELQGFLDGVKKG
QEEVLGDLSMILCDPFSSNTLVLSTVRNLQELLSQDALPRDSPDLMLLLRMLSLGQGAWD
MIDSQVFKEPRLELEVVTRFLPAMLSVLVDDYTFTVEQKLPSEEKTSLSYPTALPDNFNK
YLQENRVACEMGLYYALHIAKQRNKNALQRLLPALVETYNDMASGDIFLHLLTAHLTLLS
DEFGNEEFCSAVFDGFLLNSFSSKDNVHRHNLRLLLHLHQKVLPSCVETLVKTLEPSKQS
SDQVKELYTKLTEKLEVQKKSPPQPDEAPSLDLHPVKVPERGGGREQQKKETN
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgttagattacacaattatccctgcaatgattatcaaatatgtaacaccaccatgtcag
tgcattgattattatctcaccttcatcagtctgtttttggtctgtctgggctgtgttgtt
ttgcagacagaaaatggcattttgttaccaactcttcagtcagctcttcccttcctggac
cttcacggaactcctcggttggagtttcaccagtctgtctttgacgagctttgtgacaag
ttgatggagcgagtcgccactatcgcggagggcaaggatgaggaccgttatggtaaactt
aaagagctgctggagaagagctttccgctggtgaagatgccttccattcagccagtggtc
atgcaggtgctgaagcatcttccaaaggtaccagagaaaaagctgaagcttgtgatggct
gataaggaactgtataaggtctgtgctgttgaggtgaagaggcagatctggcaggaaaac
caggctctcttcggagatgaggtctcgcccttgctcaagcactatatcgtggcaaaggag
gcagcacttttcagcagcgatctctctattctgcacaacttcttcagcccctcccccaaa
gcaagacgccaaggagaggtagtcttgaaactgacccagatgattgggaagaatgtgaaa
ctatatgacatggtgctccagtttctgcgaacacttttcctgcgtactcgtaatgtccac
tactgcaccctgcgtgcagagctgctcatgtccctccatgacctggacatcagtgagatc
tgctcagtagactcctgccacaagttcacctggtgcttagatgcctgtatccgtgagaag
tttgtggatgccaagcgagcccgggagttgcaaggttttctggatggagtgaagaaagga
caggaggaagtacttggggacctgtccatgatactgtgtgacccattttccagtaacacc
ctggttttgagtacggtccgaaacctgcaagaattgctaagccaggatgctctacccaga
gacagtccagacctgatgctgttactcagaatgctgtctcttggacaaggtgcttgggat
atgattgacagccaggtctttaaagagcctcgattggaactggaagttgtgacccgtttt
ctcccagccatgttgtcagtacttgtggacgactataccttcactgtagagcagaaactc
cctagtgaggagaagacctccctctcctaccccacagccctgcctgataacttcaacaag
tacctgcaggagaacagggtggcttgtgagatgggtctgtactacgcactccacattgcc
aagcagaggaacaagaatgccttacaaaggttacttcctgcattggtggagacctacaac
gacatggcctctggggacatcttcctgcacctcctgacagcacacctcaccttgctctct
gatgagtttgggaatgaagagttctgctctgctgtgtttgatggcttcctcctcaactct
ttctccagtaaagacaatgtccacagacacaacctacgcctgttgcttcaccttcaccag
aaagtgctgccatcttgtgtggagaccttagtgaaaaccctggaaccctcaaaacagagc
agtgaccaggtaaaggagctgtacaccaagctgacagagaaactggaggtccaaaagaag
agtcctccccagccagacgaagccccctccctggacctccatcctgttaaagtgcctgag
agaggaggtggtagggagcagcaaaagaaggaaaccaattag

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