Oncorhynchus tshawytscha (Chinook salmon): 112232793
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Entry
112232793 CDS
T05605
Name
(RefSeq) arrestin domain-containing protein 1
KO
K26228
arrestin domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112232793
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
112232793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arrestin_C
Arrestin_N
LDB19
Vps26
Rgp1
Motif
Other DBs
NCBI-GeneID:
112232793
NCBI-ProteinID:
XP_024255786
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All DBs
Position
LG04:complement(21857767..21870524)
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AA seq
477 aa
AA seq
DB search
MGKLQEFDITFKDNKVVYSPGESLSGTLKITTTEALLCKDIKVNCQGFCGVTSKSNDTAW
MVEEQYFSSTLSVADKGTLKPGDHSFPFMFLIPASVPTSFEGNYGKVMYRVRAFIDTPRF
SKDYKVEKPFYLLSLLNLNDVPDIHGCSSSSVTKKFTYLLGVKTGTVVLKAHSDMKGYTP
GQVIQLTTELHNQSGKTTGTVVACLIQKVTYQTKKPTIDLRTLVQVEGAGVKAGKQAEWK
EQIIVPPLPQSSLADCGLINMEYFIQISLKSPEASFLLPIHIGNISVDTTSARPSRPPPP
TTDPSRSSANPTKLQNSRRSEPSSQDQETPTTPCPYPHPAPKPVPRIRVSTSSPASPSAP
PAEMDYLVMGAKGQVTEALPTESHSQLGFLSSQATVSPSAFSYAPGLTFSQNQSQSGATN
PTGPLFCVSTGATIPFFSEGSTNPKPTLYPLLPPEYSTSTLPHEAPPSYVESCSSNT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaactccaagaattcgacataacttttaaagacaataaagttgtttatagtcct
ggagagtcactttcaggcactctgaaaatcacaaccaccgaagctctgctatgtaaagat
atcaaagtgaattgccaaggcttctgtggtgtcaccagcaagagcaatgacacagcctgg
atggtggaagagcagtacttcagcagcacgctctctgtggcagataaaggaaccctgaaa
ccgggagatcacagttttccgttcatgtttctcattccagcctctgttcccacatccttt
gaaggaaactatggaaaagttatgtacagagttagggctttcattgacactcctcgcttc
tctaaggactataaggtggagaagcctttctacctgctgagtctcctcaacctcaatgac
gtacctgacatccatgggtgtagttcatcttccgttactaagaagttcacctacctgctg
ggggtaaagacaggaactgtggtgctgaaggcccatagtgacatgaagggctacacgcct
ggtcaggtcatccaactgaccacagagctccacaaccagtctgggaaaaccacagggact
gtggtagcctgtctcattcagaaagtaacttaccagacaaagaagcctaccattgacttg
aggactttagtgcaggtggagggtgctggggtgaaggctggcaaacaagctgagtggaag
gagcagattattgtacctcctctgccccagtcatctctggctgactgtggtctaataaac
atggaatacttcattcaaatctccttgaaatctcctgaggcttcgtttttgttgcccatc
cacattggaaacatctcagtggataccacgtcagcacgaccctccagaccccctcctcca
accaccgatccttctcgctcctccgcaaaccctaccaagctacaaaacagcagacgctct
gagccgtcctcccaagaccaagaaactcctactaccccttgcccttacccccacccagcc
ccaaaacctgttcccagaatcagagtctccacttcctcccctgcctcccccagtgcccct
ccagctgagatggactatctggtcatgggcgccaaggggcaggtgaccgaggccctccca
actgagagccactcccagcttggtttcttgagctctcaggccactgtctcccccagtgcc
ttcagctatgccccaggcctcaccttctcccagaaccagtcccagagtggcgccacaaac
ccaacgggacctttgttctgtgtgtccacaggcgccaccatcccattcttctctgagggc
agtaccaaccccaagccaaccctctacccactcctgcctcctgagtacagcacctcaaca
ctcccacatgaggctcctcccagctatgtcgagagctgtagcagcaacacataa
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