Oncorhynchus tshawytscha (Chinook salmon): 112232825
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Entry
112232825 CDS
T05605
Name
(RefSeq) selenocysteine insertion sequence-binding protein 2 isoform X3
KO
K19539
selenocysteine insertion sequence-binding protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112232825
03012 Translation factors [BR:
otw03012
]
112232825
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
112232825
Translation factors [BR:
otw03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
112232825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
112232825
NCBI-ProteinID:
XP_024255833
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All DBs
Position
LG04:complement(20903575..20913225)
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AA seq
830 aa
AA seq
DB search
MDKQSKLSPAVQPFVPKVQQEGRLEAPKQLTTSLPLTLPNPYLLDQGSRRHQAGKSTSGD
DSRKSPRQRPSTTDGMRGDAQSKHGYISSRRTKGTTETSAYTAGERLVRDQQTKDNNMIR
TSLDAPRRGGFRGTRSAPKSSERSEPAQLDLVTFEVKMAEFPELGGLAPGSPALPAPQKP
GTCWGSASPSLTPHHQSSVSTSTTTPVRKGQRQDPSQCTASSENGDSSLTIRQGQTVEAV
SQSSGLAVTSWANVASQPPKKVIPKKTVNNGTPSQKETSVQQEKQASEKKKKGKKKKKKS
KMPGEVGALEESEDLVIYQEPPKFEDEEEFPDLSLAFAGLARVQGHNSVVLSNMAKLVNK
EEGHREGTGLQPGDQNKDKATAGKALPSETKKGQKAEKTSGKKSKVPVQLDIGNMLAVLE
KKQQTQKYKQDTKGVILSVGGSLPVGHKNTLIQKKPLTQDKIAHNPLDSTSPLVKKGKQR
EVPKAKKPTPLKRVILKEREDRKQNRLLEERALPPSSEESKMAGDITEELCEAIGIDQDQ
RDSTDVSSSPTSPSVLEEQSEVHGETEGDTEEETEKETEETEEPTNQSQPQPCPPFRPKI
HSRKFRDYCSQVLSKDVDECVTNLLKELVRFQDRLYQKDPMKARMKRRLVMGLREVLKHL
KLRKVKCVVISPNCERIQSKGGLDEALHTIIDTCREQGVPFVFALSRKALGRCVNKAVPV
SLVGIFNYDGAQDHYHKMIELSSEARRAYEVMIENLELTSQGEQENQADQLSTGPLPSPP
ACSETEEPEYIKLWKKMLEKECNHKFLNFEEQFSSVPRASDCKEQMDEKS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcagagcaaattgtcacctgcagtccagccctttgttccaaaagtccagcaa
gaagggagattggaggcccctaaacaactgacaacttcactgcccctgacactaccaaac
ccttatctgttagaccaaggttctagaaggcatcaggctggtaagtctacttcaggtgac
gactcgagaaagagccccaggcagaggccatcaaccactgatggtatgcgaggagacgca
cagagcaagcatggctacatcagcagccgtcgtaccaaagggacaactgaaaccagtgca
tacacagctggagaacgactcgtacgtgatcagcagacaaaggacaataacatgatcagg
acatcattggatgcaccaagaagagggggttttagagggaccagatctgccccaaagtca
tcagagagatctgaacctgcccagttggatcttgtcacgtttgaggtgaaaatggctgaa
ttcccagagctgggtggtttggcacctggcagtcctgcacttcctgccccacagaaacct
ggaacctgctggggatcagcctcaccatccctcaccccccatcatcagagctcagtatcc
actagtacgactacaccagtaagaaaaggacaaagacaggaccccagtcaatgcaccgct
tccagtgaaaatggtgattcatccttgactatccgccaaggtcagactgtggaggcagtt
tcacagagcagtggcctagcagtgacctcctgggccaatgtggcctcccagcctccaaag
aaagtaatccccaagaaaacggtcaataatggcactccctcccagaaggaaacatctgtg
cagcaagaaaaacaagcctcagagaagaagaagaaagggaagaagaagaagaagaaatcc
aaaatgccgggtgaagttggagcgttagaggagtctgaggacctggtcatttatcaggag
ccacccaagtttgaggatgaagaagagtttccagacttgtctctggccttcgctggttta
gccagagtgcaaggccacaactcagtagtgttgagcaacatggcaaaactagtcaacaag
gaggagggtcacagagaaggaacaggactccagccaggtgaccaaaacaaggacaaagcc
acagcaggaaaagctctcccttcagagacaaagaagggacagaaagctgagaagaccagt
gggaagaagagcaaagtccctgtgcagctggatattgggaatatgttggcggttctggag
aagaaacagcaaactcagaaatacaagcaggacaccaaaggggttatcctctcagttggt
gggtcgctacctgtcggccataaaaacacactaatccagaagaaaccattgacacaggat
aagatcgcccacaaccccttggactcgaccagccctctggtaaagaagggcaagcagaga
gaggttcccaaagctaagaaacccacaccgctgaaaagggtgattctcaaggagagggaa
gacaggaaacagaaccgtttgctggaggagcgggcactgcccccttcaagtgaagaatcc
aagatggccggcgacataacagaggagctgtgtgaggccatcggcatagaccaggaccag
cgtgactctacagatgtaagcagcagccctactagcccctctgtgcttgaggagcagtca
gaagtacatggggagactgagggggacactgaggaggagactgagaaggagacggaggag
actgaagagccaaccaaccagtctcagccacagccctgccctccctttcgacccaaaatc
cacagcaggaaattcagagattactgcagccaggtgctgagtaaagatgtggacgagtgt
gtgaccaacctgctgaaagagctggtgcgcttccaggaccggctgtaccagaaagaccct
atgaaggcccgcatgaagagacgtctggtcatgggcctccgggaggtcctcaaacacctc
aaactcaggaaggtcaagtgtgttgtcatctcccccaactgtgaacggatccaatctaaa
ggcggtttggatgaagctctccacaccatcattgacacctgtcgggagcagggcgttccc
tttgtgtttgccctctccaggaaggccctgggccggtgtgtcaacaaagctgtgcctgtc
agccttgtgggcatcttcaactacgatggagcacaggaccattaccacaaaatgattgaa
ctgtcgtcagaggcgaggagagcttatgaggtgatgatagaaaacttggagttgacatca
caaggagaacaagagaaccaagcggatcagctaagcactgggccactgccatctccacca
gcctgctcagaaacagaggagccagagtacataaaactgtggaagaaaatgctggagaag
gaatgcaatcacaagtttttaaactttgaggagcagtttagctccgtccccagggccagt
gactgtaaagaacagatggatgagaagagttga
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