Oncorhynchus tshawytscha (Chinook salmon): 112232955
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Entry
112232955 CDS
T05605
Name
(RefSeq) thyroid receptor-interacting protein 11-like
KO
K23368
thyroid receptor-interacting protein 11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112232955
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
112232955
Retrieval pathways
112232955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAB
Mod_r
GAS
ZapB
Motif
Other DBs
NCBI-GeneID:
112232955
NCBI-ProteinID:
XP_042181051
LinkDB
All DBs
Position
LG08:complement(5826633..5887358)
Genome browser
AA seq
1993 aa
AA seq
DB search
MSSWLGGLGSGLGQSLGQVGGSLSSFTGQISTFTKDMLLEGVEEVGDASTELLVSSSKQE
QVEAEYVRLTRIHAELEEKLEASEIQNKQQSAEYRTMMQQKDVEISHLKARQSGLQEEVQ
KLQHSAQSATSDPAVLPVTTASTTTTSSSYMSRPLGAPHHQGFHGSDEMDFGDVIWSQQE
INRLSTEVMRLEAEVSHWRRVSQASVAPGAGNGDQGEVLKLQRIIKELREEMGREVDEHQ
HELAALQDAQRQKMADVIRRHRDELAEYEERIEELEEQKQTGGEEEEQTGASSSATANAL
QESSMLSDLQNTIQSLQEAAEERLKEEQDKQLKELTANLEEAGKRQATLQQEKEEAQAEN
AELLQNYTRLQTSVTELQSRVQEQEGKARNKAQLDQEIQGLRNALAGAEKEISRLKSLQS
ETKMEAEHADILELNTVIGTLRKEMRSLQERLARAEERVESDSLDGGESSPSATEQLSGL
RAELEKSEQSLSEIQEERDTLLNELEELDRQNQQATQHVISVKEQLSVQLKESEAVVARL
QSDLSTTADQKVALQQELKAQQEKLSHSAFTLNDLHMGKQQLEDTVKELRDKLGRATEMG
KEARRETQEFQRTIQEREEELSAARAELCEAGERGRESGGSIEQLEVLRRELAEMRSSQE
KMMSEDYEMKMEKQRLKTEAEQAQGRIEELARQVREVQAALTRTVLEKDTRIKALKLEKS
QLEGELGQAEKGLQEQTRQYQQTIEELTAARSMDASALQTEHERTVRLNQEKDLEISQLK
RDVEQMSSDHRDTNEMLSITVAGQKQLTDLLQEKDSFTESLRANMAATQRELEAGVQAAT
QDAETLRGALEEKDKQLGGMKEDNSHLKEEIDRLRDQQNRPQPSGLSEPRTLDIITELEN
EISQLKSTRDGLEEEGHSLKRRVEEQRGHLLSSQQSLLAQQNELEQAHQRHEQSRENYDR
LIHAKDEEIGRLQQEVDHLGHTHSSQEQEVVILQQEDKTQSSLNNGENDNEKHDLSKVEI
NRLVKGIKEKETEISQLNEKNLNLTRQLAQLVVSREEIGKLSQMLLQKDLEIQALHARVS
LGGHSQDVMFLQQQLQAYAVEREQVLAVLNEKTRENSQLRGDYQRIMDIVAGKEAVLLKV
QQENQRLSTMSDPSGSQEMFRETIQNLSRIIREKDIEIDALTQKCQTLVSVLQAGDSGGV
SSNQFEELLQDRDTLKQQVKKMEEWKMQVITTVKNMQHESGQLVEELHKLQGQVDADNDC
TSTLSVDYSRLIHSYEQKERKLGSLSHELAHVQQTISQLSSTKDVLLGKLDSVAQSPQVT
PLSAALTSTAQPPAAVEPPRHQVAAPATPGNQEGLRQELESLRALLSERETMIRTLQENN
HRLCNSAQVSDSEQRGQAEEARQVRERLDVLQRSVREKDLLIKTKGDQLTQVSESLRNRE
SDNEVLKQAVTNLKERALILEMDTRKLKDENEAVAQRSREKESEFRALQETNMQVSLLMR
EKEFERSAMSEKAAAMEKMLKDREQGNSQKSGELNQLLNELRSMQEKAVAFQQERDQVML
ALKQKQMETTAVQTELQHVKDREQRLKLELDRLRNHLLEIEESYTREVLAAEDREAELCK
RVTLLDDRLATSSSQVESTSHQASLQVESLQEQLSGTVRQRDEALTQLRAARDQVNQYAM
SLSNLQMVLEQFQQEEKAMYSSELDKYKREKDEWRRKALKLEDMASALQINLDEANAALD
SASRLTDQLDLKEEQLEELKKQVDVRQEMLEESQDKLMNLLNSTEGQVDQALMRNLFMGY
FHTPKPKRSEVLRLMGSVLGLDKDEVNQLLEEEGGHGVGGWVSGWLGGRAVQSVPNTPQR
PGAGQGGFNNSFSEMFVKFLEVESRPALPAPRLPVYDIKPLSAPPPGRTTSSAWAQQPEG
AGRGQRAAGESNPFLAPRSAAVPLMHHGSGSSSASGGHHHLLMKPISDNLPTFTPVPVSA
ESGGQVLKDLLKQ
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtggctgggtggactgggctccggcctgggccagtctctcggccaggtcggg
ggaagcctctcctcattcaccggacaaatatcaaccttcaccaaagatatgcttctggaa
ggagttgaagaagttggagatgcttccactgagctgctggtgtccagttctaagcaggag
caagtggaggctgagtacgtgcgtttaacgaggatccatgccgagctggaggagaagctg
gaggcctcagagatccagaataaacagcagtcagctgaatacaggaccatgatgcaacag
aaagatgtggagatcagtcacctgaaagcccgtcagagtggactacaggaagaggttcag
aaactacagcactctgctcagtcagctacttccgaccctgccgtacttcctgtcaccacc
gcctccaccaccaccacctcttcctcttacatgtcccgccccctgggggccccccaccac
cagggtttccatggcagcgacgagatggacttcggtgacgtgatctggtcccagcaggag
attaaccgtctgtctacggaggtgatgaggctggaggctgaggtctcccattggagacgc
gtgtctcaggcatccgtagccccaggggcaggaaacggtgaccagggagaggtcctgaag
cttcagaggatcatcaaggagctgcgtgaggagatgggtcgtgaggtagatgagcaccag
catgagttagcagcgctgcaggacgctcagagacagaagatggccgacgtcatccggcgc
caccgggacgagctggcagagtacgaggagaggatagaggagctggaggaacagaaacag
actggaggagaggaggaggaacagactggagcttctagttcagccacagccaacgctctt
caggagtcctccatgctctcagacctccagaacactatccagtccctacaggaggcagcg
gaggagcggctgaaggaggagcaggataagcagctgaaggagctgacagctaatctggag
gaggcagggaagagacaggccacgctgcagcaggagaaagaggaggcgcaggcagagaac
gctgagctgctgcagaactacactcggctgcaaacgtctgtcacagagctccagtcacgt
gtccaggaacaggaggggaaagcccggaacaaggctcagctagaccaggagatacagggg
ctgaggaatgctctcgcaggtgcagagaaggagatctctaggctgaagagtcttcagagt
gaaacaaagatggaggcggaacacgctgacattctagaactcaacactgtcatcgggacg
ttgaggaaggagatgcggagtctacaggagaggcttgccagggccgaggagagagtggag
tcagacagccttgatggaggggagtcctccccatccgccacagagcagctatcagggctg
agggcagagctagagaagagcgagcagtcgttgagcgagatccaggaggaacgagatacc
ctcctcaacgagctggaagaactggaccgacagaaccagcaggctacacagcatgtcatc
tcggtgaaggagcagctctctgttcagctgaaggaatctgaagccgttgtggctcggctc
caatcagacctcagtaccaccgccgaccagaaggtggcgctgcagcaagagctaaaggcc
cagcaggagaaactgagccacagtgccttcactctcaacgatctacacatgggcaagcag
cagctggaggacaccgttaaggagctgagagacaaacttggacgggcaacagagatgggc
aaagaggcacgcagggagacccaggagttccagagaaccatacaggagagggaggaggag
ctgtcggctgcccgggcagagctgtgtgaggctggggagagagggagagaatccgggggg
tccatagagcagctggaagtgctcaggagagaactggcagagatgaggagctcccaggag
aagatgatgtcagaagactacgagatgaagatggagaagcagaggctgaagacggaggct
gagcaggcccaggggaggatagaggagctggccagacaggtcagggaggttcaggctgct
ctcaccaggaccgtcctggagaaggacactcgtatcaaggctctgaagctggagaagagc
cagctggaaggggaactgggccaggcagagaagggcctacaggagcagaccaggcagtac
cagcagaccatcgaggagctgaccgctgcccgctccatggacgcctcggcactacagacg
gagcatgagcggacagtgaggctgaaccaggagaaggatctggagatatcccagcttaaa
agagacgtggagcagatgtcctccgaccacagagacaccaacgagatgctgtccatcacc
gtggccggacagaaacagctgaccgacctcctccaggagaaggactccttcacggagagc
ctgagagccaacatggccgccacccagagggagctggaggccggggtccaggcagccacc
caggacgctgagaccctgagaggagctctggaggagaaggacaagcagctgggaggcatg
aaggaagacaacagccacctgaaggaggagatcgatcgcctcagggaccagcagaacaga
ccccagccctccggcctgtccgagccacgcaccctggacatcatcacagaactggagaat
gagatcagccagctgaagagcaccagagacggactggaggaggagggccactccctgaag
aggagagtggaggagcagcgggggcacctcctctcctcccagcagtctctcctggcgcag
cagaatgagttggagcaggcccaccaacgccacgagcagagcagagagaactacgatagg
ctgatccacgccaaggatgaggagattgggcgcctgcagcaggaagtagatcacctcggc
cacacccactcctcccaggaacaggaagtggtcatcctccaacaggaagacaagacccag
tcgtccctgaataacggagagaacgacaatgagaaacatgacctgtcaaaggtggagata
aaccgtctggtgaagggcatcaaggagaaggagactgaaatcagccagctgaatgagaag
aacctcaacctgaccagacagctggcccaactggtggtctccagagaggagattgggaaa
ctctcccagatgctcttgcagaaggacctggagatccaggcactgcatgctagagtctcc
ctggggggccacagccaggacgtgatgttcctccagcagcaactgcaggcttacgccgtg
gagagagagcaggtgctggcagtgctgaatgagaagacgagggagaacagtcagctgagg
ggggactaccagcgcatcatggacattgtagcagggaaggaagctgtgctcctcaaggtc
cagcaggagaaccagaggctgtccaccatgtctgacccctcaggcagccaggagatgttc
agagagaccatccagaacctgtcccggatcatcagagagaaggacattgagatcgacgcg
ctgacccagaagtgccagaccctggtgtcggtgctgcaggcaggagactctggaggcgtc
agctccaaccagtttgaagagctgctgcaggacagggacacattgaaacaacaggtgaag
aagatggaggagtggaagatgcaggtgatcaccacagtaaagaacatgcagcatgaatct
ggacagctggtagaggagctccacaagctacagggacaggtggatgcagacaacgactgc
acctcgactctctccgtggactacagccgtctgatccacagctatgagcagaaggagagg
aagctcggcagtctcagtcacgaactagcccacgtccaacagaccatcagccagctgagc
agtactaaagatgtcctcctggggaaactggacagtgtggcgcagagtccccaagtcacc
ccactgtctgctgccctgacgtctactgcccagcctcctgctgcagtggaacctcccaga
caccaggtggcagcacctgcaacaccagggaaccaggaaggactgagacaggagttggag
tctctgagagccctcctgtctgagagggagactatgatcaggaccttgcaggagaataac
caccgcctgtgtaactcagcccaggtgtcagacagcgagcagcgaggccaggccgaggag
gccagacaggtcagagagagactggacgttctgcagcgctctgtcagggagaaagacctg
ctcatcaagactaaaggagatcaactcacccaggtgagcgagagcctgaggaaccgtgag
agcgacaacgaggtgttaaaacaggccgtgaccaacctgaaggagcgagctcttatcctg
gagatggataccaggaagctgaaggatgagaacgaggctgtggcccaacggagccgggag
aaggagtcagagttcagagccctgcaggagaccaacatgcaggtgtccctcctcatgagg
gagaaggagtttgagaggagcgccatgtcagagaaggctgccgccatggagaagatgctc
aaggacagagaacagggcaacagccagaagtctggagagctcaaccagctcctgaacgag
ctgaggtccatgcaggagaaagctgtggccttccagcaggagagagaccaggtcatgctg
gctctcaaacagaaacagatggagacgacagccgtacagacagagctgcagcatgtgaag
gacagagagcagcggttgaagttggagctggaccgactacgtaaccacctgctggagata
gaggagtcctacacacgggaggtcctcgccgcggaggacagggaggcggagctatgcaag
agagtcacgctattggacgacagactggccacttcctccagtcaggtggagagcaccagc
caccaggcgtctctccaggtggagtctctccaggagcaactgagtggaacggtgaggcag
agagacgaggccttgactcagctcagagcagcacgggaccaggtcaaccagtacgccatg
tccctgtccaacctccagatggtgctagagcagttccagcaagaagagaaagccatgtat
tcgtcagagctcgataaatacaagagggagaaggacgagtggagaagaaaagcacttaaa
ctggaggacatggcctcagcacttcagatcaacctagatgaggctaatgctgctctggac
tcagcctccagactcactgaccagctggacctgaaggaagaacagctagaagagctcaaa
aaacaagttgatgtgaggcaggagatgttggaagagtctcaggacaagttgatgaacttg
ctgaatagcacagagggacaagtagaccaggctctgatgcggaacctgttcatgggatac
ttccacaccccgaaacccaaacgctccgaggtgctgaggctcatgggtagtgtcctggga
ctggacaaggatgaggtcaaccagctgctggaggaggagggaggccatggtgtcggcggc
tgggtgtccggctggttgggaggcagagctgtacagagtgtccccaacacaccacagaga
cctggagcaggacaggggggcttcaacaactcgttctctgagatgtttgtaaagttcctg
gaggtggagtctaggccagcgctccctgcccccagacttcctgtctatgacatcaaacct
ctcagtgccccgcctcctgggaggaccaccagctcagcctgggctcaacaaccagaagga
gccggcaggggacagagagcagctggggagtccaaccctttcctggctccccgctctgcg
gccgtaccgctgatgcatcatgggagcggtagttccagtgcttcgggaggacaccaccac
ctcctaatgaaacccatctcagacaacctgcctaccttcacccccgtgcccgtctccgct
gagagcggcgggcaggtgctcaaagacttactcaagcagtga
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integrated database retrieval system
