Oncorhynchus tshawytscha (Chinook salmon): 112232979
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Entry
112232979 CDS
T05605
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112232979 (stxbp5a)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112232979 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
112232979 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
ANAPC4_WD40
WD40
Lgl_C
Synaptobrevin
WD40_like
Motif
Other DBs
NCBI-GeneID:
112232979
NCBI-ProteinID:
XP_042177827
LinkDB
All DBs
Position
LG05:39174934..39332131
Genome browser
AA seq
1147 aa
AA seq
DB search
MKKFNIRKVLDGLKEQASSSASSGQSGTQENNLMQETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQKRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYESGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYYADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEEKQNTEIVDEDPFAIQIMAWCPESRMLCVAGVSANLIIYRFSKQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRDLPTPGAASPSPQTTGPPTHPSSSSNSSDGVRDNVP
CLKVRSTPLKQSPGYQVDLVVQLVWVSGEPPQQITSLALNSSYGLIVFGNSNGLAVVDYL
QKTVLLNLGTVELYGSNDPYQRQPRSPRKTRQPSGGLCDINEGSASEDRCKSPTSVLALN
HQQFYNGSGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDYRDNSFSRSRSSSVTS
IDKEAREAITSFHFCETFARKGDSIITPCLYVGTSLGTVLAVALNLPPAGEQRLLQPVIV
LPSGTLGRLKGSILRMAFLDNTGTFLPPAFELWYEPNAVGADSEERDKARKRRPVSVSPS
TSQELQESQYAVVCSEKQAKVIALPSQNCIFKHSITETSFVLRADVVQMNIGNCVACFCA
NGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQETCE
NLQEMLGELFTPVETPEAPNRGFFKGLFGGGATSLDREELFGEMQAGKASRGLAQHIPGP
QGLEGMKGAASGVVADLARARIALDERGQKLGELDERTAAMLASADSFGKHAHDMMLKCK
DKKWYQF
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtactggacggcctaaaggagcaagcgtcttcctcg
gcttcgtctggccagtcgggcacccaggagaacaatttgatgcaggagacccttcagtcc
gagaattttcaactctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatg
gcccatgacccagtccagaagatcctggccattgggacccagagtggcgccctcagactg
tttggtcgtccaggtgtcgagtgctactgtcaacatgagagtggagccgctgtcatctcg
ctacagtttctcatcaatgagggggcgctggtgagtgctctggcagatgacagcgtgcac
ctttggaacctgaggcagaagaggcccgccatcctccactcactcaagttcaacagagag
aggatcacgttcgtccacctgcccttccaaagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtccttcacactctcaggctacgtcatcatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcctgtggtccacataagtgac
aaccccatggatgagggaaagcttataattggatatgagtctgggatcgtggtcttgtgg
gatctgaaatcaaagaaggcagactaccggtacacttatgacgaggcgatccactcggtt
gcctggcaccatgagggcaagcagttcatctgtagtcactcagacggaacgctcaccata
tggaacattaagggccagggcaagccatttcagacgatcaccccacacggaaaacagccc
aaggatggaaagaagccagagccttgcaaacccatcctcaaagtggagtacaagaccact
agactgggagacccatttatgatcctgtccggaggtctgtcttatgacacggtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggaaatggattacccc
atcgtagacttcctcacgctctgtgagacgccataccctaacgattttcaggaaccttat
gctgttgtggtccttctagaaaaggatttagtggtgatcgaccttgcacaaaatggttac
cccatattcgagaacccctatccactgaccatccacgagtctcctgtgacctgctgtgag
tactatgctgactgccctgtggacctcatacccgcactttactctgttggctccagacag
aagcgacagggctacagcaaaaaggaatggcccataagtggtggtaactggggccttgga
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttttgg
gatgcttctgcaataatgctccaggtactatacaagctgaagacagccaaggtgtttgag
aagagcaggaataataaggaggaaaagcagaacacagagattgtggacgaggacccgttt
gccatccagatcatggcctggtgtcctgagagcaggatgctgtgtgtggccggggtgtct
gccaacctcatcatataccgcttcagcaagcaggagatcaccaccgaggtcgtacagctg
ttggaggtgcgtttgcagtacgaggtgaatgacatggagtcccctccagaggggggagga
gggggtgaccgtgacctgcccacccccggagcagcctcacccagcccccagaccactgga
cccccgacacacccctccagcagcagcaactcctctgacggggtccgagacaacgtaccc
tgccttaaggtgcgtagtacccctctaaagcagtctccagggtaccaggtagatttggtg
gtgcagctggtatgggtgagtggagagcccccccaacagatcacaagcctggccctcaac
tcctcctacggcctgattgtgtttgggaacagtaatggtctggcggtggtggactacctc
cagaagacagtgctgttgaacctggggacagtggagctgtatgggtctaacgatccctac
cagaggcagcctcgctctccacgcaagacgcgccagccttccggaggcctgtgtgatatc
aacgagggctctgcctcagaagaccgctgcaagtcccccacttcagtgttggcgttaaac
catcagcaattctacaatggaagtgggggtagaggagcaaagatgtcacggaaattaagc
ttgcctactgagctaaagccagacttggtcctcctgtctgtatgtcctccgcggggcgcc
aacccactagactaccgggacaactccttcagccgttcacgctcctcctccgtcacctcc
atcgacaaggaggcacgcgaggccatcacctccttccacttctgtgagacattcgctcgg
aagggggacagcatcatcacaccctgcctgtacgtgggcacttccctgggcacagtgctg
gctgtggccctcaacttgcctcctgctggggaacagaggctactgcagcctgtcatcgtc
ttgcctagcggtaccctggggcgtctgaagggcagtatcctgaggatggccttcctggac
aacacgggcaccttccttccccctgccttcgagctgtggtacgagcccaacgccgtgggc
gccgacagtgaggagcgagacaaagcccgtaaacgccgcccggtctctgtctcgccctcc
acctcccaggagctgcaggagagccagtatgcggtggtgtgctctgagaaacaggctaag
gtcatagcactgccctcccagaactgcatattcaaacacagcatcacagagacatcgttc
gtcctgagggctgacgtggtccagatgaacatagggaactgtgtggcctgtttctgtgct
aacggacacatcatgaccctcagtcttccggggctgagaccgttgcttgatgtaaactac
ctgccgctgacagacatgcggatagcccggaccttctgcttcaccaacctgggccaggcc
atgtacctcacctcccccactgagatacagaggatcacatacagccaggagacctgcgag
aacctgcaggagatgctaggagaactattcacaccagtggagaccccggaggctcccaac
cgaggattcttcaaagggctttttgggggaggagcaacttccctggacagagaggagcta
tttggtgagatgcaggcgggtaaagcatcccgtggccttgcccagcacatcccaggtcct
cagggcctggaaggcatgaagggggcagcctcgggcgtggtggctgacctggcacgtgcc
cggatagcgctggacgagagagggcagaaactgggcgagctggatgagaggacggccgcc
atgctggccagcgcagactcctttggcaaacacgcccacgatatgatgctgaagtgcaaa
gacaagaagtggtaccagttctga
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integrated database retrieval system
