Oncorhynchus tshawytscha (Chinook salmon): 112233012
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Entry
112233012 CDS
T05605
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112233012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112233012
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
112233012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Hairy_orange
Motif
Other DBs
NCBI-GeneID:
112233012
NCBI-ProteinID:
XP_024256133
UniProt:
A0A8C8J6U1
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All DBs
Position
LG16:complement(51751669..51752944)
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AA seq
172 aa
AA seq
DB search
MAPCSTNFSFQHLRFAEKDIKIRKPIVEKMRRDRINGCIEQLKLILEKEFHKQDPNTKLE
KADILEMTVSFLRQQLQPDPSQRDYGEGYSQCCRESLQFLSGSPKRDTTSIITSAGPLQG
LQQQLSTQVQRSIQQHPVVHSTSPVSSTLRPTTNTNTTLQDTGAKGPVWRPW
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggctccctgttcaaccaacttctctttccagcacctgaggttcgcagaaaaagacatt
aagataaggaaacccattgtggagaagatgcgtcgggatcgcatcaacggctgcatcgag
cagctcaagctcatcctggagaaggagttccacaaacaggaccccaacaccaagctggag
aaagccgacatcctggagatgaccgtgagcttcctgaggcagcagctgcagccggatcca
tctcagagggactacggcgagggttattcacaatgttgtagggagtctctgcagttcctg
tccggaagccccaagagagacaccacttccatcatcacctcggctggacctcttcagggg
ctccagcagcagctctccacccaggtccagagatccatccagcagcacccagtggtccat
tccacctccccagtctcctccaccctccgacccaccactaacaccaacaccacgctccag
gacacaggagctaaaggcccagtctggaggccctggtag
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