Oncorhynchus tshawytscha (Chinook salmon): 112233125
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Entry
112233125 CDS
T05605
Name
(RefSeq) FERM and PDZ domain-containing protein 3-like isoform X1
KO
K23959
FERM and PDZ domain-containing protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112233125
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
FERM domain-containing proteins
112233125
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FERM_M
RA_2
FERM_C_FAK1
Yop-YscD_ppl_1st
FERM_F2
Motif
Other DBs
NCBI-GeneID:
112233125
NCBI-ProteinID:
XP_042181942
LinkDB
All DBs
Position
LG08:79002438..79048511
Genome browser
AA seq
1615 aa
AA seq
DB search
MLKDDSLLLIPNVLKVFLENGQIKSFTFDSRTTVRDVISSLQDRLSLRYIEHFALVLESG
GLDQNQRQHLLQENQPLSHVVHRTYFQGMKCLFRICFFPKDPADLLRRDPAAFEYLYIQS
RNDVIKERFGMDWKSDVTLRLAALHIYITVSSARPNQKISLKNVEKEWGLEPFLPLTLLP
TIKEKNVCKTLSQLLKTYQHLPPSGNKVPPLQGKLQYMRVLNDLPPFGGLLFHTVGLDEK
QSATTLLVGPRHGIGHVIDLKNNLTTVLTEFSRVAKIQLHRENQGVARVEVAIQETKPLV
LLMEWPDASNFACLISGYYKLFVDPKRTIYYRTPGQSYMIKADYRGSHHTHPRSSTTAVS
SGDRRGDERERPHTRDPGSQSQKTATAPLPAESQHLGLCHVHLREQQQLQELHMQAEPEL
DVNENLISQEAPGRPRTKSDPTLQKTEMIAGRPESPVQESSVAFRSRAQTMGQVQRTTRF
FCDSCKARLRAEGVAVALNGGRSSASSKHCSSACASCDGGAVDLMALPPPGNEEEEEEEV
EDVGRKLQLPHPAIAAPPPGFRDNSSDEDDAKRGRKSRPNPVIRPSPATGAAVSKSSAKA
SSKEVVPAPEDVPVTLIDNVATRTVRDHAQELDDALVSTLQALEALAASEDFPHHPQQPA
QTTGLIVLAAITPESSLDSGHETNSSELTDVSEMVSAMKQHQNQAYLLAHHINKERIFSR
RDFPLAIPGCTTQTIGGGAFSMGQIRGGCPSKPVILSKTVPLKLSPGQETASPGLSTVEQ
GSDVTQEPTQSEPSEGKKAKPEPTKACTPDRPAMSPEELKLSNPGQAPKVGKDQRSPGTA
VGKLSPNFSVGVKGKKSAPLSPATTNKALPILLPVDRTASAKICPTNMCQDAETASSKTI
KPSSSKDLLPIDDLFCTCPVREPGPQLRLKDPHTQKVVVFHSSSPTDDERLCAKGLQLAS
SKESTVRAAGGAGADPILAKPRPQAPTKYSQSPHMPVKAERKEAAEAKAERSQGKAQAEP
HKCPPKTFPLLGDPTHPTCSVDKVSTLSSADSKNQGGGKGKAQRSAPFLSIKNLLSATFP
ARIRRETDERRAQLQKVRQYELEFLEELLKPKSSGGEYLPQGSSPVPSGTPCACQLLTSP
VLKAPGISREQRRSCDCKRMCRGIRLPDTPVGSIAETQQHRGRERPLSKTPPATSKTPHP
QGAQRRPQTLEIKTTRIRSTSLESREPRGEQASCLPTCTSRTPDCMGAPQYKKLQRRYSI
GEVDNAEGTQLYTEIKPKAKNLEKEMERVRAAGLRLPTTVEPVHNQTHTTAAEAKGKKGV
FFIQGEELLRESREGAPTEMLLGLPSEDSDDREKCCSFCFCYRKCEAADESSEKEELSYS
TTLQVLPGMQLGSQTLPIVSKTLQVLHAEGCSGEEEEVEEEEEEPQTQEIDLRACGTLEG
SLARVESLQGKTFSLPDGFLNAQLDANELLAILRQCANIPQVDNESRLQPSRIAEYKQEL
AVRFKEFRAACRRVASVEKSPTRMLSVVTASFLVLCELTQTFIKLVRGVRSEAQRLQLLR
KVEEVAINYTLLLRAAEEAMGHSSSLPNKSVSPQVTTTSTNMGSLSRPIKTLPTQ
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaggacgactctttgctactcatccctaatgtgctgaaggtgttcctggagaat
ggtcagatcaagtcctttacgtttgacagccgcaccactgtcagggatgtgatctcgtcc
ctgcaggaccgcctgtccctgcgttacatcgagcactttgccttggtgctggagtcaggt
gggctggaccagaaccagagacaacacttgctgcaggagaaccagccgctctcacatgtg
gtgcacaggacgtatttccaggggatgaagtgtctctttcgcatctgtttcttccccaag
gatccagcagacctgctcaggagggaccctgcagccttcgagtacctctacatacagagt
cgcaatgacgtcatcaaagagcgcttcggcatggactggaagtctgacgtcacattgcgc
ctggcggcgcttcatatctacatcacagtgtcatcggccagacccaatcagaagatctcg
ctcaagaatgtggagaaggagtggggtctggaacctttcctccccctcactctacttccc
accatcaaggagaagaatgtgtgtaagaccctgtcacagctgctcaagacctatcagcat
ctgcctccctccggcaataaggtccctcctctccagggaaagctgcagtacatgcgtgtg
ctcaacgatcttccgccctttggaggcttgctgttccacaccgtcggactagatgagaag
cagtcggccactacgctgctggtgggtccgcggcacggcatcggtcatgtgatcgaccta
aaaaacaacctgaccacggttctgacagagttcagtcgtgttgctaagatacagctgcac
cgggagaaccagggcgttgcccgagtagaggtggccatacaggagaccaagcctctggtc
ctgttgatggagtggcctgatgccagtaactttgcctgtctcatctccggctactacaag
ctgtttgtggatcccaaacgaaccatctactaccggacacctggtcagtcttatatgatc
aaggcagattacagaggttcccaccacacccacccgcgctccagcactacagctgtgtcc
agtggggaccgacgaggggacgagagggaaagaccccatacgagggacccagggtcccag
tctcagaagacagcgaccgccccactgcccgcagagtcccaacacctgggtctatgccac
gtccatctccgggagcaacaacagctgcaggagctccacatgcaggcagaacccgagctc
gacgtcaacgagaacctcatttcccaagaggcaccagggcggccccgtaccaagtctgac
ccgacgctgcagaaaacagagatgatcgccgggaggccggaaagccccgtccaggagagc
tcagtggccttcaggagcagagcccaaaccatggggcaggtccagcgaactacacggttc
ttctgtgactcttgcaaggcccggttgagggcagagggagtggctgtggccttgaacggt
ggacgcagcagcgcctcatcaaagcactgctccagcgcctgtgcctcctgcgatggaggt
gcagtagacctgatggccctgcctcccccagggaatgaagaggaggaggaagaagaggtg
gaggacgtaggaagaaagctgcagctgccccatccggccattgctgctcctccacctggg
ttcagggacaacagctcagacgaagatgacgccaagagaggacggaagtctcgaccaaac
cccgtcatccgtcccagccctgcaaccggggctgcagtcagcaagagctctgccaaggct
tcttccaaggaagtggtaccggctccagaggatgtcccggtgacgttgatagacaacgtg
gccaccaggacagtacgggaccatgcccaggagctggatgatgctctggtgtccactctg
caggccctggaagccctagctgcatcagaggacttcccccatcacccacaacagccagct
cagaccacagggttgattgtgttggcggccattacgcccgagtcatcgctagactcaggg
cacgagaccaactcctctgagctgacagacgtctcagagatggtgtcggccatgaagcag
caccagaaccaggcctacctgttggcccaccatatcaacaaggagcgtatcttcagtcgc
agagacttccccttggccataccaggctgcaccacccagactattggaggcggtgcgttc
tccatgggtcagatccgcggcggctgcccctcgaaaccagtgatcctcagtaagactgtt
cccctaaagcttagccctggtcaggagactgccagtccaggtctgagcacagtggagcag
gggagtgacgttacccaagaaccaacgcagagtgagccaagtgaaggcaagaaggcaaaa
ccagagcccaccaaagcgtgcaccccagaccgccctgcgatgtcacctgaggagctgaaa
ctctccaatccagggcaggcacctaaggtcggcaaagatcaaaggtcgcccggtactgct
gtgggcaaactaagcccgaatttctctgtgggcgtcaaggggaagaagtctgcgcctctg
agcccggccactaccaacaaagccttacccattctcttgcctgtggacagaactgcctcc
gccaagatttgccccacaaacatgtgccaagatgccgagactgcctctagcaagaccatc
aagccttcaagctctaaagacctcttgccaattgatgacctgttctgcacatgcccagtt
agagaacccgggccacagctaagactgaaggatccacatacccagaaggtggtggtgttc
cactcctcttcccctacagatgatgagcgtctttgtgccaaaggcctccaactggccagt
agcaaagagagcacagtgagagcagcaggaggagcaggagcagaccccatcttggccaag
cccagaccccaggccccaaccaagtactcccagtccccacacatgcctgtgaaagctgag
aggaaggaagcagcagaggccaaggcagagaggtcccagggtaaagctcaagctgagcca
cataaatgccccccgaagacattccctctcctgggagaccccacacaccctacctgctct
gtggacaaggtctctactctctcctctgctgacagcaagaaccagggtggcggtaaaggg
aaagcccagcgtagcgctcccttcctaagtatcaagaaccttctgtcggccacgttccca
gctcggattcgcagggagactgatgagcgccgagcccagctccagaaggtccggcagtac
gagttagagtttctggaagaacttctgaagcccaagtcgtctgggggcgagtacctaccc
caggggtcctcgccagtcccctcaggcaccccatgtgcttgccagctccttacaagtcct
gtgctaaaagcccctggaatctccagagagcaacgccgcagctgtgactgcaagaggatg
tgcagaggtatccgactgcccgatacgccggtcggctcaattgcagagacacagcagcat
agaggtagagagagacccctctccaagacccctccagcgacctccaaaacccctcacccc
cagggagctcagaggagacctcagaccttagagatcaagaccacccgaatccgctcgacc
agtctggagtcgcgggaacccaggggggagcaggcttcctgtttgcccacctgcacctct
cgcacaccagactgcatgggcgctccgcagtacaagaagctccagaggcggtatagcatc
ggagaggtggacaatgctgaaggcacccagctgtacaccgagataaaacccaaagccaag
aacctggagaaggaaatggagcgagtgagggccgcagggctgaggcttccaacaaccgtg
gagcccgttcacaatcaaactcacacgactgctgcagaggcaaaggggaagaaaggagtg
ttcttcatccagggagaagagctgctgagggagagcagagagggggcgccgacggagatg
ctgctggggctgcctagcgaggacagtgacgacagggaaaagtgctgctctttctgtttc
tgctacaggaagtgtgaagcggcggacgagagcagcgagaaagaagagctgtcctactcc
accaccctccaggtcctgcctgggatgcagctgggctctcagaccttgcccattgtcagc
aaaacgctccaggttctccacgctgagggctgcagcggggaggaggaggaagtagaggaa
gaagaagaggagccgcagacacaggagatcgacctccgggcctgcgggactctggagggg
agtctggcaagggtcgaatccctgcaaggaaagacgttcagcctgccggacggtttcctc
aatgcccagctggatgctaatgagctgctagccatcctgcgacagtgcgctaacattccc
caggtggataacgaatcacgcctacagccgtcccggatcgccgagtacaagcaggagctg
gcagtgcgcttcaaagagttcagggcggcgtgcaggcgggtggcgagcgtcgagaagagc
cccactcgcatgctgagcgttgttacggccagcttcctggtcctctgcgaactgactcag
accttcatcaagctggttagaggggtgcgttcagaggcccaaaggctgcagctgctgcgg
aaggttgaagaggttgctatcaattacactttgctgttgcgtgcagccgaggaggcgatg
ggccactccagtagtctgcctaacaagagcgtgagtccccaagttactacaacctccact
aacatgggctccctctctcgcccaatcaaaaccctgcctacccagtag
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