Oncorhynchus tshawytscha (Chinook salmon): 112233163
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Entry
112233163 CDS
T05605
Name
(RefSeq) steroid hormone receptor ERR2 isoform X1
KO
K08553
estrogen-related receptor beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112233163
03029 Mitochondrial biogenesis [BR:
otw03029
]
112233163
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112233163
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
112233163
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112233163
Nuclear receptors [BR:
otw03310
]
3. Estrogen like
3B. Estrogen-related receptor
112233163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
112233163
NCBI-ProteinID:
XP_024256360
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All DBs
Position
LG11:32979100..33038264
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AA seq
506 aa
AA seq
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MGSAYGNLVSEYITRRGSWPRTATPLRARSLWSLWPLQTASSSRPRASLSNSLGRLLSPL
ATLEPSHFWLLNRMAVDDRHLPSSCGSYIKTEPSSPSSVIDTVSHHSPSGNSDASGGYVS
AMNSHSNGLDSPPMFTPGGLGAGPCRKRYDDCSSTVMEDSPIKCEYMLNSIPKRLCLVCG
DIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVG
MLKEGVRLDRVRGGRQKYKRRMDAENTAYLGLTLPPPAKKPLTKIVSHLLVAEPEKIYAM
PDPTMPESDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLGDQMSLLQSAWMEILILS
IVFRSLPYEDELVYAEDYIMDEEHSRLTGLLDLYVSILQLVRKYKKLKVEKEEFVTLKAI
ALANSDSMHIEDVEAVQKLQDALHEALQDYESSQHQEDPRRAGKLLMTLPLLRQTATKAV
QHFYSIKVQGKVPMHKLFLEMLEAKV
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgggatcagcttacggtaatttggtttcagaatacattaccagaagaggctcctggccg
agaacggccaccccgctaagagctaggagtctgtggtcgctgtggccactgcagacagcc
agctccagccggcccagggcttcgttgtccaattcattagggcgattactcagtccactg
gccacactggagccctcacatttctggctgctgaatagaatggctgttgatgaccggcac
cttccctccagctgcgggtcctacatcaagacggagccgtccagcccctcttcagtcatc
gacacggtcagccaccacagcccaagcggcaactcggacgccagcggtggctatgtcagc
gccatgaacagccactccaacggcctggactctccgcccatgtttacgcccggcgggctg
ggcgccggcccctgccgcaagcgctacgacgactgctccagcaccgtcatggaggactca
cccattaagtgcgaatacatgttgaactccatccccaagaggctgtgcctggtctgtgga
gatatagcctctgggtatcactatggcgtggcctcttgtgaggcctgcaaagccttcttt
aaaaggacaatacaaggcaacatagaatacagctgtcccgccacaaacgagtgtgagatc
acaaaacggagacgcaagtcatgtcaagcctgccgctttatgaagtgtctcaaagtgggg
atgctcaaggaaggtgtgcgtctggaccgtgtgcgagggggaagacagaagtacaagagg
aggatggatgcagagaacacagcgtacctgggcctcacactcccccctcctgccaaaaaa
cccctcacaaagatagtgtcccacctgctggtggccgagccagagaagatctacgccatg
cctgaccccaccatgcctgagagtgacatcaaggccctcaccacgctgtgtgacctggct
gaccgggagctggtggtcatcattggctgggcaaagcatatcccaggcttctccacgctg
tcgctgggagaccagatgagtctactgcagagcgcctggatggagatcctgatcctaagc
atcgtgttccgctcgctgccctacgaggacgagctggtgtatgcagaggactacatcatg
gacgaagaacactcgcggctcactggcctgctcgacctctacgtgtccatcctgcagctc
gtacgcaagtacaagaagctgaaggtggagaaggaggagtttgtcaccctcaaggccatc
gctctcgccaactcagactccatgcatatagaggacgtggaggcagtgcagaagctccag
gatgcgctccatgaggccctgcaggactatgagagcagccagcatcaggaggacccccgg
cgggcaggcaagctgctcatgaccctgcccctgctgcgtcagactgccaccaaggccgtg
cagcacttttacagcatcaaggttcagggcaaggtgcccatgcacaaactcttcctggag
atgctggaagccaaggtctga
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