Oncorhynchus tshawytscha (Chinook salmon): 112233171
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Entry
112233171 CDS
T05605
Name
(RefSeq) tetratricopeptide repeat protein 8 isoform X1
KO
K16781
tetratricopeptide repeat protein 8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112233171
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
BBSome
112233171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_16
TPR_17
ARM_TT21_5th
TPR_11
TPR_9
ARM_TT21
PknG_TPR
TPR_15
NatA_aux_su
TPR_30
TPR_COPA_B
DUF5112
Motif
Other DBs
NCBI-GeneID:
112233171
NCBI-ProteinID:
XP_024256374
LinkDB
All DBs
Position
LG11:32567561..32574088
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AA seq
515 aa
AA seq
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MEVPMDPLFLAWSYFRRRKFQPCSDICSKILEDSPYDQEPDSSSHISEAAWSLKTRSLTE
MVYIDEVEVDQEGIAEMMLDESSIAQVARPGTSLRRPETSHGGGPTPAIRPITQSGRPIT
GFVRPSTQSGRPGTMEQAIKTPRTAHTARPVTGASGRFVRLGTASMLTNPEGPFINLSRL
NLAKYAQKPNLSKTLFEYIFHHENDVKNALDLAALATENAQFKDWWWKVQLGKCYYRLGL
HRESEKQFRSALNHQEVVDTYLYLAKVYQRLDQPITALNLFKQGLDHFPGEVTLLTGIAR
IHEEMNNITSATEYYKDVLKQDNTHVEAIACIGSNHFYTDQPEIALRFYRRLLQMGVYNC
QLYNNLGLCCFYAQQYDMTLSSFERALALVANDEEQADVWYNIGHVAVGIGDLTLASQCF
KLALAFNNDHAEAYNNLAVLELRKGHIEQSKAFLQTAASISPHMYEPHFNYSTLSNKIGD
LQSSYTAAQRSEDAFPEHVDTQQILKHLRQHFAVL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgccgatggatcccttgtttctcgcatggagctactttagaagacggaagttc
caaccatgttctgatatttgttcgaagatattagaggacagtccatacgaccaggaacct
gactcctcatcacatatttctgaggctgcatggagtctgaagacccgttctctgacagag
atggtgtacatcgatgaggtggaggtggaccaggaggggatcgctgagatgatgctggat
gaaagctccattgcccaggttgctcgccctgggacatcactgaggcgtcctgaaacaagc
catggaggtggacctactccagctatcaggcccattacccaatcgggacgaccaatcaca
gggtttgtgaggcccagtacccagtctggcagaccagggacaatggaacaggccattaag
accccgcgcacagcacacactgcccgccctgtcactggtgcatctgggagatttgtccgg
ctgggaacagcctccatgttaaccaatcctgaggggccatttataaatttgtcaagactc
aacttggctaaatatgcccagaagcccaatttatccaagaccttgtttgagtacatcttc
catcatgaaaatgatgtaaaaaatgctttagacctggctgctctggccactgagaatgct
cagttcaaagactggtggtggaaagtccagctggggaagtgctactacagacttggttta
caccgggaatcagaaaaacagttccgatctgctctcaatcatcaggaggtggtggacaca
tacctctatctggccaaggtgtatcagcggcttgatcaacctataactgcactgaacctc
ttcaagcaaggtctggaccacttccctggggaggtcactctcttaacaggaattgctcgc
attcacgaggagatgaataacatcacctcagccacagagtactacaaagatgtcctgaag
caggacaacactcacgttgaggctatcgcctgcataggcagcaatcacttctacacggac
cagcctgagatcgccttgcgcttttaccgacggctgctgcagatgggggtatataattgc
cagctgtacaacaacctgggattgtgctgcttttatgcccagcagtatgatatgaccctg
tcctccttcgagagggctctggccctggtggccaatgatgaggagcaggctgacgtctgg
tacaacattggacacgtggccgtgggaataggagacctgactctggcatcccagtgtttt
aaactggccttggccttcaacaacgaccatgctgaggcctataataacctggccgtgctg
gagctacgcaagggacacattgagcagtccaaagctttcctccagaccgctgcatcaatt
tcccctcacatgtatgagccacactttaactactccactctgtcaaacaagattggagat
ctgcagagtagctacacggcagcccagaggtcagaggatgccttccctgagcatgtagat
acccagcagatcctgaaacacctgcgccagcactttgctgtgctgtga
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