Oncorhynchus tshawytscha (Chinook salmon): 112233246
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Entry
112233246 CDS
T05605
Name
(RefSeq) teashirt homolog 1
KO
K09236
teashirt
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112233246
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112233246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_4
zf-C2H2
Zap1_zf1
zf-C2H2_6
Zf-C2H2_ZNF451
Homeobox_KN
zf-met
DUF760
DUF7410
Motif
Other DBs
NCBI-GeneID:
112233246
NCBI-ProteinID:
XP_024256505
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All DBs
Position
LG03:26062588..26112285
Genome browser
AA seq
1162 aa
AA seq
DB search
MPRRKQQEPRRSAAYSPEDEFKAGAVDEEHLQDDGLSLNGEDTAYLCNEGEDGGQPPSYR
ASPLSNGTNPDAGYGSPLSDASDRLTDFKSTSSRDGHEREEAPLPSGLNNGLSLRDSLAQ
MKAVYANLISDASWSSIAMDIMKATPATAGAIPTATSPTATTTHNNNHSENSNASSHHHN
GRRSTATAYHHRSSGSSNGTAVNSISSNSGTSSGGGGASNGGAVAYDWHQAALAKTLQHT
PYQLLPEPSLFSTVQLYRQNNKLYGSVFTGASKFRCKDCSGAYDTLVGLTVHMNESGHYR
DDNKDKEEERGKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY
QKVPLKEPVPAMATKLMPSAKKRALQDALVSPCSPDSVHGSGGHMPQGDIGKDPKSTTNP
YVTPNNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTNSA
SKKGKQLVFDPVVEEKIQSIPLPPTTNRLPVPSVKSQPVSPALSCGSDEKREPEDERMEA
SEPVEKKIKEEMEEPGEKIEVNSGSYKYLTEEDLEEAPKGGLDILKSLENTVSSAISKAQ
TGTPQWGGGYPSIHAAYQLQGHMKHAALHSSVQSVQIQPVFNSGLRGLVTQDSSSVIHSP
RSPASPPSRRSNVTAMEELVEKVTRKAVAAAVKKEEKMVSLDRPSHPSSLKSPSPVLKEQ
MDHHSAPNDFTIGKPLVRNSSPGNVESELVCKKEPKESLVDNHHSHSKKNGPETRQLPIT
NGTNSLGIITDHSPERPFINPLSALQSIMNNHLGKASKPVSPAGDPLAMLYKISNSVMEK
PAFNQTQAKQPEPINCYYQYESNDQPMDLRKSKNSNNNSNSSTVSNSNSSINGNKPIMSS
LSLSDISSPLRENALMDISDMVKNLTGRLTPKSSAPSSISEKSDADGSAFEDALDDLSPV
QKRKGRQSNWNPQHLLILQAQFCSSLRETPEGRYAMTDLGPQERVHICKFTGLSMTTISH
WLANVKYQLRRTGGTKFLKNMDSCQPVFLCGDCASQFRTASAYIGHLESHLGFSLKDLSK
LSNEHLREQQAASKVITDKMTFGSTLASLTSPDDDTGSVYQCRLCNRTFVSKHAVKLHLS
KTHGKSPEDHLVFVTALEKLEK
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggagaaagcagcaagagcccaggcgatcagcagcttactcgccagaggatgag
tttaaggcaggagcagttgatgaggaacacctgcaggatgacgggctgtcactgaacggg
gaggacactgcgtacctttgcaacgagggagaagatggaggccagccgcccagctaccgg
gcctctccactcagcaacggcaccaacccagacgctggttacggctccccgctcagcgat
gccagcgaccggctcacggacttcaagagcacctcctccagggatggccatgagagagag
gaagcccccctcccctctggactgaacaatggcctttccctgagggatagcctggctcag
atgaaagctgtctatgcaaacctgatctcagatgcttcctggtccagcattgccatggac
atcatgaaagccacaccggctactgctggggccatccccactgccaccagccccaccgct
actaccacacacaacaacaaccacagtgagaacagcaatgctagcagccaccaccacaat
gggagaagaagtaccgccaccgcctaccatcacagaagcagtggcagctctaacggcact
gcggttaactccatcagtagcaacagtggcaccagcagtggtggtggtggtgctagtaac
ggtggggctgtggcctatgactggcaccaggcagccttggctaagaccctccagcatacc
ccttaccaactgctgcctgagcccagcctgttcagcacggtgcagctctaccgccagaac
aacaagctctacggctcagtcttcaccggcgccagcaagttccgctgcaaagactgcagc
ggcgcctacgacacgctggtggggctcacggtccacatgaacgagtcgggccactaccgt
gacgacaacaaggacaaggaggaagagcggggcaagcgctggtccaagccccgcaagcgc
tccctgatggagatggagggcaaagaggacgctcagaaggtgctcaagtgcatgtactgc
ggccactccttcgagtctctacaggacctgagcgtccacatgatcaagaccaagcattat
cagaaagtgcctctcaaagaaccggtgccagccatggccactaaactgatgccctctgcc
aaaaaaagagccctccaggacgccctggtatccccatgctccccagactctgtacatggt
agcggtggccacatgccccaaggggacattgggaaagaccccaagtccacgacaaacccc
tatgtcacacccaacaaccgctacggctatcagaacggtgccagctacacttggcagttc
gaggctcgcaaggcacagatcctgaagtgcatggagtgcgggagctcccacgatacactg
cagcagctgactgcccacatgatggtcacgggtcacttcctcaaggtcaccaactctgcc
tcaaaaaagggcaagcagctagtgtttgacccagtggtggaggagaagatccaatccatc
cctctgccacccaccaccaacaggcttcccgtccccagtgtcaaatctcagcctgtctcc
cctgcactctcctgcggctctgacgaaaagagagaaccggaagacgagaggatggaggcg
agcgaaccagtggagaaaaagatcaaagaggagatggaagagccaggtgagaagattgag
gtgaactctgggtcgtataagtatctgacagaggaggacctggaggaggctcctaaagga
ggtttggacatcctcaagtccctggagaacactgtgtccagtgccatcagcaaggcccag
acgggcacgcctcagtggggtggtggctaccccagcatccacgctgcttaccagctccag
ggccacatgaagcatgcagcactgcactcctcggtccagagtgtgcagatccagcctgtg
ttcaacagcgggctccgcgggctagtgacccaggactccagctcagtgatccactccccc
aggagccctgcatctccgccctctcgcaggagcaatgttactgccatggaagagctggtg
gagaaggtcacaaggaaagctgttgctgctgctgtgaagaaagaggagaagatggtcagc
ttggaccgccccagtcatccatcctccctcaagtcgccgtctcctgtactgaaagagcag
atggaccaccactcagcacccaatgacttcaccatcgggaagcccctcgtgaggaacagc
agccctggaaatgtagagtcagagctggtctgcaaaaaggagcccaaagagagcctggta
gacaaccaccacagccattcaaagaagaacggcccagagactcgccagttacccatcacc
aacggcaccaacagcttgggcatcatcaccgatcactcaccagagaggcctttcatcaac
cccctcagcgcacttcagtcaatcatgaacaaccacctgggcaaggcctccaagcccgtc
agccccgcgggcgacccgctagccatgctctacaagatcagcaacagtgtgatggagaaa
ccggccttcaaccagactcaagccaagcaacccgagcccatcaactgctactatcaatac
gagagcaacgaccagcctatggacctgaggaagtctaaaaacagcaacaacaacagcaac
agcagcactgtcagcaacagcaacagcagcataaatggtaacaaacccataatgtcaagc
ctgtctctgtctgacatttcttctcctctgagagagaatgctttgatggacatctcagac
atggtgaagaaccttacaggcaggctgacacccaagtcctccgccccgtcatccatctcc
gagaagtcggacgcagacggcagtgcgttcgaggatgctctggatgacctctccccggtc
cagaagaggaaagggcggcagtccaactggaacccccagcacctcctcatcctccaggct
cagttctgctctagcctgcgggagacaccggagggccgctacgccatgacggacctcggc
ccccaagagcgggttcacatctgtaagttcacaggcctctccatgaccaccatctctcac
tggctggccaacgtcaagtaccagctccggcggactggcgggaccaagttcctgaagaac
atggactcctgccagcctgtgttcctctgcggtgactgtgcctcgcagttcaggactgcg
tccgcctacatcggccacctggagtctcacctgggcttcagcttgaaggacctgtccaag
ctgtccaatgagcacctacgggagcagcaggctgcctccaaagtgatcacagacaaaatg
acttttggcagcaccctggcatccctgacctcaccagacgacgacactggctcagtttac
cagtgcaggctttgcaatcggacattcgtcagcaagcacgcggtcaaactgcacctcagc
aagacccatggcaagtcaccagaagatcacctggtgttcgtcactgctcttgagaaactg
gagaagtag
DBGET
integrated database retrieval system
