Oncorhynchus tshawytscha (Chinook salmon): 112233315
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Entry
112233315 CDS
T05605
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112233315
Membrane trafficking [BR:
otw04131
]
Protein recycling
Others
EARP complex
112233315
Endosome - Golgi transport
Tethering complex
GARP complex
112233315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
DUF7716
Motif
Other DBs
NCBI-GeneID:
112233315
NCBI-ProteinID:
XP_024256631
LinkDB
All DBs
Position
LG31:8618030..8627202
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AA seq
543 aa
AA seq
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MIQVIVDNPVMEQEFLEQLHELNNKINFAKELSFRETLSCSDIQDIVDHLKIKAVTKIRE
FILQKIDSFRKPMTNYQIPQNTLFKYRFFYQFLLANERTVAKEIRDVYVDTMSKIYYSYF
KSYSGRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGAVLSPAELE
GPILIPHTAQRGDCRYPYETLFRSQHYALLDNGCREFLFLSDFFMVAGNSALDLFNSVMG
KTLSLFLKSMSTYVSDCYDSIAVFLCIHIILRFRAITTKRAIPALDKYWEAVLELLWPRF
ELILEMNIQSIRNTDPQKLGVLDTRPHYITRRYEEFSSAIVSINQTFTSERTHTLLGQLQ
VEVENFVLKMAAEFPSRRDQLIFLINNYDMMLNVLMERAADDSKEVEGFQQLLQARSQEF
IEEILSSPFGGMIAFVKASEALIEKGQLDRLKNDEAQITQLIRGFSSTWKQSVEALSQDV
MRSFTNFKNGTGIIQGALTQLIQYYHGFHKVLSQPTFRSLAVRSELINLHHLMVEVKKHK
PNF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgatccaggtaatcgtggataacccggttatggagcaggagttccttgagcagctccat
gagctcaacaacaagatcaattttgccaaagagctcagcttcagggagactttgtcctgc
tctgacatccaggacatcgtggaccacctcaaaatcaaggctgtcacaaagatcagagaa
tttatcctgcagaagattgattccttcagaaagcccatgaccaactatcaaatcccccag
aacactctctttaagtacaggtttttctatcagttcctcttggcaaatgaaaggacagta
gctaaggagatcagggatgtgtacgtggacaccatgagtaagatctattacagctacttc
aagtcctacagcggcaggctgctcaaagtacagtatgaggaggtggcagacaaagatgac
ctgatgggagtggaagacacggccaagaaaggtttcttctccaagccctccctgaagagc
aggaacaccatcttcaccctgggccagcggggggccgtgctgagccctgccgagctggag
gggcccatccttatcccccacactgcccagagaggggactgcaggtatccctatgagacg
ctgttccgcagtcagcactacgccctcttggacaatggctgtcgagagttcctcttcctg
tctgacttcttcatggtggctggaaactctgcgctggacctcttcaacagcgtcatggga
aagacactcagcttgttcctgaagagcatgtccacctatgtatcggattgctacgacagc
atcgctgtgtttctgtgtatccacatcatcctgcgtttcagagccatcacaaccaagagg
gccatcccagccctggacaagtactgggaggcggtgctggagctgctgtggcccaggttt
gagctcatcctggagatgaacattcagagcatccgcaacacggacccccagaaactgggc
gtgttggacaccagaccacactatatcacacgtagatacgaagagttctcttctgccatc
gttagcattaaccagacattcaccagcgagcgaacccacaccctccttggccaactgcag
gttgaagtggagaactttgtcctgaagatggctgcagagttcccttcacgcagggaccag
ctcatcttcctcatcaacaactacgacatgatgctcaatgtcctcatggagagggcagcc
gatgacagtaaagaggttgagggcttccagcagctcctccaggccaggagccaggagttt
attgaggagattctgtcctccccctttggtggcatgatagcgtttgtgaaggcgagcgag
gcgttgatagagaaaggccagctggatagactgaagaatgatgaagcccaaatcacccag
ctaatcagggggttttccagcacatggaaacagtctgtggaagctctgagtcaggatgtc
atgagatccttcaccaacttcaagaacggcactggtatcattcagggggcactcacccag
ctcatccagtactaccatggcttccacaaggtgctgtcccagcccaccttccgcagcctg
gccgtgcgctcggagctcatcaacctgcaccacctcatggtcgaggtcaagaaacacaag
cccaacttctaa
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