Oncorhynchus tshawytscha (Chinook salmon): 112233337
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Entry
112233337 CDS
T05605
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112233337
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
112233337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
PBP-Tp47_c
Motif
Other DBs
NCBI-GeneID:
112233337
NCBI-ProteinID:
XP_024256670
LinkDB
All DBs
Position
LG31:9086976..9115286
Genome browser
AA seq
1392 aa
AA seq
DB search
MSEEDTGIPKELLESLRDAVGRKIKLTLKKRLKLEVKGDKLENRVLALASHRVFLLTARV
PAKIEQTFNYLDIQGIISNKPTQLLLEYDRGQLSLKLGSVEDVDEVVAHIGSCLHRICPG
LSPVKAMKKLTLKPPERTAALQSLWEDQATTDLGPCGGFSHMYWCLCDQLGLPFREEVQW
DVDTIYQTQDTRELNLQDFVHLDNRDLVAIIVVLEYNQWFTKLSTKDYKLSTDVCEEILR
VVSRSSRLEELVLENAGLRSDFVQKLANALTCNPASALHTLNLTNNSLEDKGISALSAQL
AKLPMGLKHLNLSKTSISQKGVNSLAQALSANPAVPTTLTHLDLCGNSLRGDDLSNLYNF
LGQHNSLVTLDLSSSDCCLDQVCTSLLRGSLKHLSVLNMSKSVFSHRRSKDVPHSFKQFF
GTALALSSVNLSGTKLPLEALKALLLGLGCNPNLSEVSLDLSSSELRSGGSQILEGCIAE
IPNISSLDISDNGLDSDLTTLLVWLAKNRSIRHLSLGKNFNNIKSKNLSQVLDNLVHMIQ
EEESPLTSLSLADSKLKGDLSIVLNALGSNTSLIRVDISGNGMGDMGAKMLAKALQINTK
LRTVMWDKNNVSLQGLQDVAAALEKNHTIRFMPIPIIDAAQALKASPEKTEDALLKMEQY
LLRNHETRKYLQEQAYRLQQGIVTTTTQQMMDMICVKVQDHLNSLRYTETDVVQEDMKVA
RNLMKDARNSKRLLPNLYHMRGSPGGMGSPIQDKLESMAGEMARVMDGQLQTLLQSMVDT
AEGLCPHVMKRSNLHQELMKAGAGRMTIPHSFITTTLLEQSGVDIINKISEVKLSMASFL
SDRIVDEILESLSRSQNTLAEHLTRKPQPLLHQEPNKMEVLEETVLQPEAQTQEQSPHHA
ERLEEMDTYVSKRKSILCRMLRPVSVAFGEFMFYIPEMEFDLDKALEEVPIYEEDPPPPA
PSDKKPTYFGELPTMEARKLEHHTKLRPKPKKRTKPSRAPREPICTSPPPEVEQNDLGKV
DEGVDEFFYKKITKLSFKRPTLRGSSNIQEGSEKKRESRKSGFLNLIKSRTLKSEKSHGT
AAITTPAAATVSTVTEEPLSPKAPLWDHSEISPDHSRKPPTPEPTEEQHSESDSKGSPHG
GRHFGVPVMGPLMGMDLLAEMRKMHEKIVAHKSDSSDKADDKKGELASISQSGKPKGQTS
SIAPRSKPTGVTPRSPAPQSIKPHMGPHTLGPLSPRASSSHSPDDTPDSCLGNVSPKGPL
PAPRLKREPSDYEREEESSHINVELTGDSSPFDLDQEMDRSAIGGRQWSSLKRSTSVVQE
VEGRERTKSLPASVRPSSTVDLVHCQSPGVFAKDNTEEDFSPTPDTDQRQNLRPDNMEDT
VTTSQCRKKSYI
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaagatacgggtattcctaaggagttgctggagagtctgagagatgccgtg
ggaaggaagatcaagctcaccctgaagaagaggttgaaactggaggtcaaaggtgacaaa
ctggagaaccgagttctggctttggcatcccatcgggtctttctgcttactgcaagggtc
cctgccaagattgaacagaccttcaattacctagatatacaggggatcattagtaacaag
cccactcagttgttgttggagtatgaccgaggccagctgtccctgaagcttggctctgtg
gaggatgtggatgaggtggtggcccacattgggagctgtctacacagaatctgtccaggc
ctctccccagtgaaggcgatgaagaagttgaccctgaagcctcctgagaggacggccgcc
ctacagtctctctgggaggaccaggccaccacagacctagggccgtgtggtggtttctcc
cacatgtactggtgtctctgtgaccagctgggtctgccattcagagaggaggtgcagtgg
gatgtggacacaatctatcagacccaggacaccagggaactgaacctgcaggatttcgta
catcttgataaccgagatttggtggccatcattgtggtcctggagtataaccaatggttc
accaagctctccacaaaggactacaaactgtccacagatgtgtgtgaagaaattctgcga
gttgtgtcccgctccagtcgcttagaggagctggttttagagaatgcaggtctcagaagt
gatttcgtgcagaagctagccaacgctctgacctgcaaccctgcctctgcacttcacacc
ctcaacctcacaaacaactccctggaggacaagggcatatctgctctcagtgcacagctt
gccaaactcccaatgggtctcaagcatttgaacctttcaaagacctccatatcgcaaaaa
ggggttaacagtctggcccaggcgctgagtgccaaccctgctgtccccactaccctcaca
catctggacctctgtgggaactcactccgaggagacgacctctcaaatctgtacaatttc
ctgggtcaacataacagtctagtaactctggatctgtccagcagtgactgctgtctggac
caagtctgcacttcacttctacgaggttctctcaagcacctctcagtgctcaacatgtcg
aagagtgttttctctcacaggagaagtaaagatgtcccgcattccttcaagcagttcttt
ggcactgcactggcgctgagcagtgtcaacctgtctggaaccaagctccccctggaggca
ctcaaagcacttttactaggtcttggttgcaatcccaatctcagtgaagtatcactggat
ctcagcagctctgagctaagatctggaggctctcagattctggagggctgcatagctgag
attcccaacatctccagcctggacatctcagacaacggtttggattcagacctgaccact
ctcttggtgtggctggccaaaaatcgctccatccgccatctctcactgggcaagaacttc
aataacatcaaatccaaaaatctgtctcaagtcttggacaacctggtgcacatgatacag
gaggaggaatcgcccctgacgtccctctccctggccgactccaagctgaagggagatctg
tccatcgtgctgaacgctctgggcagcaacaccagcctgatccgggtggacatcagtggc
aacggcatgggagacatgggggccaagatgctggccaaggccctacagatcaacaccaag
ctccggacagttatgtgggacaaaaacaatgtcagcctacaaggcctccaggatgtggca
gcagctttagaaaagaaccacaccattcgcttcatgcctatccccatcatcgatgctgcc
caggccctcaaagccagccctgagaaaacagaggacgccctactaaagatggagcagtat
ctcctaaggaaccacgagactcgaaaatacctccaagagcaagcttaccggcttcagcaa
ggcattgtcacgacaaccacacaacagatgatggacatgatctgtgtaaaggtgcaggac
cacctgaactccctgaggtatacagagaccgacgtcgtccaggaggacatgaaggtggcc
aggaacctcatgaaggacgccaggaactccaaaagactactgcccaacctgtaccacatg
aggggatctcctggtggcatgggcagccccattcaggacaagctagagtccatggccgga
gagatggccagggtcatggatggacagctacagacgttgttgcagtctatggttgacacc
gctgagggcctctgtccccatgtgatgaagaggagcaacctgcaccaggagctgatgaag
gcaggtgcaggcaggatgaccatcccccatagcttcatcaccaccacactactggaacag
tcaggagtcgacatcatcaacaagatcagtgaagtgaagctcagtatggcttccttcctc
tcagaccgtatcgtggatgagatcttggaatctctgtcccgttcccaaaacactctggca
gaacacctgaccaggaaacctcaacctcttctccaccaggagcccaacaagatggaggtg
ctggaggagacagtcctccaacctgaggcccagacccaggagcagagtcctcaccatgct
gagaggctggaggagatggacacatatgtgtccaagaggaagagcattctctgcaggatg
ctgcggcctgtatctgtggcctttggtgagtttatgttctacatcccagaaatggagttt
gacttggacaaggccctggaagaagtgcctatatatgaggaggatccgccccctcctgcc
ccatcggacaagaagccgacttactttggcgagctgcccactatggaggcccgaaagcta
gagcaccacaccaagctccgccccaaaccgaaaaagaggaccaaacctagccgagcacca
cgggaaccaatctgcacctctccaccaccagaagtggagcagaatgacctggggaaagtg
gatgagggtgttgatgaattcttctacaagaaaatcaccaaacttagttttaaacgaccc
accctgaggggctcctccaacatccaggaggggtcggagaagaaacgggaatcccgtaaa
agcggcttccttaacctcatcaagtctcgcaccttgaagtccgagaagagccatggaaca
gctgccatcaccaccccagctgctgcgactgtcagcactgtgacagaggagcccttgtcc
cccaaggctccgttgtgggaccactctgaaatctcccctgaccactcacgaaagccacca
acccctgaacccactgaggaacagcactccgagagtgacagtaagggtagtcctcatggt
ggccggcactttggggtccccgtaatgggccccctaatgggaatggacctcctggcggag
atgagaaaaatgcatgagaaaatagtcgctcataagtcggactcttcagacaaggcagat
gataaaaaaggcgagttggcctctatatcccaatcaggaaagccaaagggtcaaacatcg
tcgatagcgcccaggtctaaacccaccggtgtcacacccagatccccagcaccccagagc
atcaagccccacatgggaccacacactttgggacccctgagccctcgtgccagcagcagc
cacagcccagatgacacccctgactcctgtcttggaaacgtatccccaaaaggaccactg
cccgcccctcgcctgaagagagagccctcagactatgagagggaggaggagagtagccac
attaatgttgaactcacaggagactccagcccatttgacttggaccaagagatggacagg
tctgcaattggtgggagacagtggtcctccctgaagcgctccacttctgtggtacaggaa
gtagaaggtcgagaacgcaccaagtccctccctgcatctgtgagaccttcatccacggtg
gaccttgtccactgccaaagccctggggtgtttgctaaagacaacaccgaagaggacttc
tctcctacccctgacacggaccaaagacagaatctcaggcctgacaacatggaggacacc
gtgacgacatcccagtgtagaaagaaaagctacatctag
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