Oncorhynchus tshawytscha (Chinook salmon): 112233378
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Entry
112233378 CDS
T05605
Name
(RefSeq) UV radiation resistance-associated gene protein isoform X1
KO
K21249
UV radiation resistance-associated gene protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112233378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112233378
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112233378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS38
ATG14
C2
DUF4523
RNase_Y_N
Motif
Other DBs
NCBI-GeneID:
112233378
NCBI-ProteinID:
XP_024256730
LinkDB
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Position
LG30:complement(20151407..20291413)
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AA seq
749 aa
AA seq
DB search
MNSITGRDHPVNSGASSSRALHVELTSQQRRLRHLRSIAARNIVNKNGSPLLDTYFTLHL
CLEDRISRDFYKSEVIRDSLNPTWRSLDFGMLPDLLDTSVSCFVVKIWGGREEQFILLIE
WKVNLDGLRYTGQQIRSRNPNEIIFGLNDGYYAADFDHKDHSERKKNSLLQVDQSSVRNS
YSVFSLLRLHTAQRAIKQTQVTVQKIGKDIEEKLRTTTACTKRKKERECMQLRLGTLRSE
LERQRKALGRETDLQQKERAVLQKKEEAFSTKHRSLELERESLTEQQKECTAKRELFLKS
NAQLTFRCRQLLSELSYIYPIDLVTMAANQSDYVICGVKLPNSEDFQALSGFPSPVEVCG
CFALRGWCKSTKDDGSVAVALGYTAHLVLMISCFLQIPLRYPVIHKGSRSSIKDTITDKL
SEKEREFPLYPRGERFQFEYGVYLINKNIAQLRYQHGLSTPDLRQTLPNLKNFLEHGLLV
RCDRHHVSSSIPVPTGAKSQLSVSAASEVGFPTHTSSPDPGSLRKRASSEADKQKYKSSP
PPSYDTTMSMDQPQSAPPDPKPSPRHLSSSLDSSIDLAKTLEVQGPALGEGEIEVEREVK
EVVEEQEQQPSSTTTGGSDSPTPAGSTTSEQHADHTMNGSVVPGEGLGGPATGLMLTIAL
NPEMCCSVEQAEEIMGTEATGLGLGMGLVDGARLEDYPCIPVEHAVAVECDEQVLGELDA
AGFEEFSRRIYALNENMSSFRRPRKNSEK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaactccatcaccggtcgggatcaccctgtcaactctggagcttcatcttctcgagcc
ttgcacgttgagctcacatctcagcagaggcggttacgtcatctcagaagcattgcagcc
cgcaacattgtcaacaagaatggctctccactactggacacatattttacccttcatctc
tgcttagaggaccggatatccagagacttttacaagagtgaggtcatccgagattcattg
aatccaacatggcggagcctggattttggcatgctgccggacctcctggacacgtctgtg
tcctgctttgtggtgaagatctggggcggccgagaggaacagttcatacttctcatagag
tggaaggtcaacctggacgggcttagatacacagggcaacagatccgctccaggaatcca
aatgagatcatatttggattgaatgatggctactatgcagctgactttgatcataaggac
cactctgagaggaagaagaacagtttactccaggtggaccagagttcagtgaggaactcc
tacagtgtcttctctctgctgaggctccacacggcccagagagccatcaagcagacccag
gtgactgtgcagaagatcggcaaggatattgaggagaaactgaggacgacaacggcctgc
accaagcgtaagaaggagcgggagtgtatgcagctgcgtctgggaacgctacgcagtgag
ctggagagacagaggaaagcgctgggccgggagacagacctgcagcagaaggagagagca
gtgcttcagaagaaagaggaagcattctccaccaaacaccggagtctggagcttgagagg
gagtcgttaacagagcagcagaaagaatgcactgccaaaagggagctgttcctcaagtcc
aatgctcagctcaccttccgctgtcgtcagctcctctctgagctgtcctacatctacccc
atcgacttggtcaccatggccgctaatcagtccgattatgtcatctgtggagtgaagctg
cccaactcggaggatttccaagcgttgagtggcttcccatcccctgtggaggtgtgcggc
tgcttcgcgcttcgggggtggtgtaaatctacgaaggatgatgggagtgtggcggttgcc
ctgggttacacggcccacctggtgctgatgatcagctgcttcttgcagatccctcttagg
tatcctgtcatccacaagggttcccgctcctccatcaaggacaccatcacagacaagctc
agcgagaaggagagagaattccccctgtaccctcgaggagaacgctttcagtttgaatat
ggagtctacctgatcaacaagaacatcgcccagctgagataccagcatggcctgtccact
ccagacctccgtcagaccctgcccaacctcaagaacttcctggagcacggccttctagtc
cgatgtgaccggcaccatgtctccagctccatcccggtcccgacaggagccaagtctcag
ctcagtgtctcggctgcgtccgaagtgggcttccccacccacaccagctctccagatccg
ggctcactgaggaaaagagccagttccgaggcagacaagcagaagtacaagtcctcccct
cctcccagctacgacacgaccatgtccatggaccagccccagagtgcaccgcccgacccc
aaaccctcccccaggcacttgtcctcctccctggactctagcattgacctggccaagact
ctggaggttcagggaccagccctgggggagggagaaatagaggtagaaagagaggtaaag
gaggttgtggaggagcaagagcaacagccctccagcactactacaggaggctcagattcc
cccactccggctggaagcaccaccagtgagcagcatgcagaccataccatgaacggctca
gtagtgccaggcgaggggctgggggggcccgcaacagggctaatgttgaccatagcatta
aacccagagatgtgctgctcagtggagcaggcagaggagattatggggacagaggccaca
ggcctgggtttagggatgggccttgtggatggggccaggctggaggactacccctgcatc
cccgtggagcacgccgtggccgtggagtgtgacgagcaggttctgggcgagctggatgcc
gccggcttcgaggagttctcccgccgcatctatgcactaaacgagaacatgtccagcttc
cgcaggccacgcaagaactctgagaagtga
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