Oncorhynchus tshawytscha (Chinook salmon): 112233534
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Entry
112233534 CDS
T05605
Name
(RefSeq) zinc finger CCHC domain-containing protein 8-like
KO
K13128
zinc finger CCHC domain-containing protein 8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112233534
Spliceosome [BR:
otw03041
]
Complex C
Other components
Complex C specific factors
112233534
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PSP
zf-CCHC
Knl1_RWD_C
KASH_CCD
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
112233534
NCBI-ProteinID:
XP_024257010
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Position
LG04:complement(30153403..30158837)
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AA seq
725 aa
AA seq
DB search
MAEFDFGDCELFEQLEESMPVATHIRFTEEGGEEGSELSERLEECEETIRSLIEENQELK
RKLKVLTRPSGINVENIKIDGPLLQILFANNSISKQCRQEIEDSICSIVQKHQLHGEVEK
GNPSSNVNPQSSSFIMEEDQKTKTCGIKKIKEAFSMVGSVLYFTSFCVDKLGQPLLNDNP
QQTEGWEVPKYQQVFSQVIALDGQEVQMKEKRPKPCCFNCGLDGHQLRDCPQPKDMARIN
EKRKEFSQGNQGNLSNQRYHAEELEERFARYKPGIMSEELMSALGVEMNTLPPHIYRMRR
LGYPPGWLKEAEMENSGLTLYDGKVSKDGELTEVDHGQSISYDVSKLVDFPGFNISAPPS
VKDDYRLYGSIPIQHNHMKQNFADYLSNNFPMPGANCNKRLHESESTPQQTKKRRSDARS
SDMDVDSDQDTTPRRHRSSDSFQFQPPLPPDSPSFGSPPPLPHGTPPATPTPPPLPKGTP
PPTPTNGSPALRGRSVGVGEESVGGEEEELTLEELEEQQRLIWAALENADTTTNSDSETP
AVGTPLPSSPSISTPAQVDTETEMEEGEAEDEEKEGSVEVSSHNSYEQISVDPSSSKFQD
DVEDKGKVVEDESSLLKTPVQEESPMSPEAAADRGNVLAQRPSLLQTPVQQEGRQPDPSD
QDAVEGDLSDSVGKVTAVPHRSRFAHGIIPFEDTPEFTEVAEATGTYLRIRDLLKGSPRN
MAKKK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtttgattttggtgactgtgagctctttgaacaattggaagagagtatgcct
gttgctactcacattcggttcactgaggagggtggagaggaaggctctgagctcagtgaa
agattggaggagtgtgaggagacaatccggagtctaatagaagagaatcaagagttgaag
agaaaattgaaagttttgacaaggccaagtggcattaatgttgaaaacatcaagattgat
gggcctcttctacagatccttttcgcaaataatagcatctcaaagcaatgccgtcaagaa
attgaagactccatctgtagtattgttcagaaacatcagctgcatggagaagttgaaaaa
ggaaatccctccagcaatgtcaaccctcagtcttcaagtttcattatggaagaagatcag
aagaccaagacctgtggcatcaaaaagattaaggaggccttcagtatggtgggaagtgtc
ctgtatttcaccagtttctgcgtggacaaacttgggcagcccctgcttaatgataacccc
cagcagacggaaggatgggaggttccaaaatatcagcaggtcttcagccaggtcatcgcc
ttagatggacaggaagtacagatgaaagagaaaagacctaagccttgttgtttcaactgt
gggttggatggtcatcaactgcgagactgtcctcagccaaaggacatggccagaatcaat
gagaagcggaaggagttttctcagggtaaccagggcaacctgagcaatcagcgttaccat
gctgaggaactggaggagcgatttgccagatacaaacctggaatcatgagtgaggagctg
atgtctgcactgggagttgaaatgaacactctaccccctcacatctaccgcatgaggcgg
ttaggctacccacctggctggcttaaggaggcagagatggagaactcaggtctcacgcta
tatgatgggaaggtgtcaaaagatggagaactaacagaggtcgaccatggacaaagtatt
tcctatgatgtttccaagctagtagatttcccaggcttcaatatatctgcaccacctagt
gtgaaggatgactacaggctatatggctctattccaatacagcataaccatatgaagcag
aattttgctgattatctgtccaacaattttccaatgcctggtgccaactgcaataagagg
ctgcatgaatctgaatcaactccccagcagacgaagaaaaggagatctgatgccaggagt
tcagatatggatgttgattcagaccaggatactacaccccgccgccaccggagctcagac
agcttccagttccagcccccgctgccccctgactcgccatcctttggttcaccacctccc
ttacctcatggtacaccaccagccactcccactccaccccctcttcctaagggaacacct
ccccccacacccactaatggttcaccggctctacggggacgcagtgtgggagtgggtgag
gagtctgtaggtggggaggaggaagagctgacactggaggagctggaggagcagcagagg
ctgatctgggctgcattggaaaatgctgataccaccaccaacagtgactctgagacacca
gctgttggaacacccctccccagctcgcccagcatctccacacctgcccaagtcgacact
gaaactgaaatggaggaaggtgaggctgaagatgaagaaaaggagggatctgtggaggtt
tccagccacaacagttatgagcagatcagtgttgatccatcttctagcaaatttcaggat
gatgttgaagataaaggcaaggtggttgaagatgagagcagcttgttgaaaacaccagtc
caagaggagagccctatgagtcctgaagctgctgcagatagaggcaatgtgcttgcacag
aggcccagcttgctgcaaacaccagtccaacaagagggccgtcagccagacccctcagat
caggatgctgtcgagggagatctgtctgactctgtggggaaggtaacagccgtgcctcac
cggagtaggttcgcacatggcattattccctttgaggacacgccagaatttacagaggtt
gctgaggccaccgggacataccttcgaatccgagacttgctgaaaggttcccctcgaaat
atggcgaaaaaaaagtga
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