Oncorhynchus tshawytscha (Chinook salmon): 112233536
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Entry
112233536 CDS
T05605
Name
(RefSeq) huntingtin-interacting protein 1-related protein isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112233536
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112233536
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
LPP
Motif
Other DBs
NCBI-GeneID:
112233536
NCBI-ProteinID:
XP_024257014
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Position
LG04:30215056..30248710
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AA seq
1065 aa
AA seq
DB search
MNSIRRVPSRVKTKMTETNLGAERDNFDKKQLSSISKAINSNEAPVKEKHARRIILGTYR
EKGAFTFWSYALGIPLSSNAIVSWKFCHVLHKVLRDGHHNSLQDCMRHHSNIVEMGQLWG
NLHDRYGQLVALYCKLLCTKMEFHMKHSEIRPNLEVTDEVLERVAGTDVNNVFQLTVKVF
DYLDAELRLAETVIRQLNTSIAISTTTSGQCRLSPLIQVIQDCSHLYHFTVKLLFKLHAC
LPADTLQGHRDRFHDQFHSLKTFFNKARDMQYFKRLIQIPKLPESPPNFLHAASLAKHAR
PVVVIPSEDEPEQQEEDDYDDDDPEPLIDVTMPSMMVPQQFDKFDQTFGPSNDRDIQIEN
LQQDLEKLRADLERVKGEAQRYITQLKSQINSLETELEEQRVQKQRALVENEQLRMELEA
TRRRNAEHEIVQATFGEAETRAQATEQRYTKLKEKHTELVSSHAELLRKSADTVKILSAT
QQTQEEVERTKQQLAFEVDRIKLDADMKLEEQKFEMKKLKRDFEEKRAEVEHVKGTLQRT
EKVGEQLTSSMLALQAEKERLMRSASEKEAELSSLSQAAQLQQSSLQQERDRSTRELGEL
QGKLQEKSRREVQLQQKLLEEQFSLLQGTVSEAEYIIQDAVAKLDDPLHIRCTSSPDYLV
SRAEATLGSIDKVKKGHSDYLKNMGDAGRLLRALTNFSHLAADTIINGSATAHLAPTDHA
DRLTENCRGCATQSLQFLKDLKSKASLQRADPASIHIVVEKILKLGEELRPKGMDVRQDE
LGDLVDKEMAATSAAIEKAVSRIDEMMNQARMDTSGVKLEVNERILYSCTDLMKAIHLLV
LTSTDLQKEIVEGGRGAATIKEFYARNSRWTEGLISASKAVGWGATQMVESADKVVLHTG
KYEELIVCSHEIAASTAQLVASSKVKAYRNSTKLTALQQASRHVNEMAANVVASTKTGQE
HLEDKDTMDFSGMSLIKLKMEEMESQVKVLELENQLGNERLRLGELRKKHYNIAGVPAAD
LPEGNGLDPSLAPVAPSSPKSSKPSVMRKPDLAQKPNLPPKNMFR
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaattccatacgacgggtgccttcaagggtgaaaaccaaaatgaccgaaaccaattta
ggtgcggaaagggataattttgacaagaagcagctcagcagtatcagcaaagccatcaac
tccaacgaggcgcctgtgaaagagaaacatgcacgccggataattctggggacctacaga
gagaagggggcctttaccttctggtcctacgccttgggcatccccttgtccagcaacgcc
atcgtcagctggaagttctgccacgtgcttcacaaagtgctgcgggatggccaccataat
agccttcaggactgcatgagacatcacagtaacatagttgagatggggcaactatggggc
aaccttcatgacagatatggacagctagtggctctgtactgtaagctcctttgcacaaag
atggagtttcacatgaagcattctgaaatccgacccaacctagaggtgacagatgaggtt
ctagagcgtgttgcaggaaccgacgtcaataatgtgttccagctcactgtgaaagtgttt
gattacctggatgcagagttgaggctagccgagacagtgatccggcagctcaacacgtcc
attgccatctctacgacgacgtcaggccagtgtcgcctgtcccccctcatccaggtcatc
caggactgcagtcacctctaccacttcaccgtcaagctgcttttcaaactgcacgcctgt
ctcccagcagacaccttgcaaggacaccgtgatcgttttcatgaccagttccacagcctc
aagaccttcttcaacaaagccagagacatgcagtacttcaagagactcatccagatcccc
aagctgccagagtctcctcctaacttcctgcacgcggcttccctggccaagcatgcaagg
ccagtggtggtcatcccaagtgaggatgagcccgagcagcaggaggaggatgattatgac
gatgatgaccctgaaccacttatcgacgtcaccatgcccagcatgatggtgccacagcag
ttcgacaaatttgatcagactttcggaccttccaatgacagggatatccagattgagaac
ctccagcaggacttggagaaattgagggcagatctggaaagggtcaaaggagaggcccag
cgctacatcacacagctcaagtcccagattaacagccttgagacagagctggaagagcag
cgggtgcagaaacagcgtgccctggtggagaatgaacagctgcgcatggagctggaggcc
actcggcgccgcaacgctgaacatgagatcgtgcaggccaccttcggagaggccgagact
agagcccaggccacagagcagcgctacaccaagctaaaggagaagcacacggagctggtg
tccagccatgctgaactgctcaggaagagtgcagacaccgtgaagattctgtcggcaaca
cagcagacccaggaggaggtggagaggaccaagcagcagctggctttcgaggtggatcgc
atcaaactggatgctgacatgaagcttgaggagcagaagtttgagatgaagaagcttaaa
agggattttgaggaaaagcgggctgaggtggaacatgtcaaaggcactctgcagcgcact
gagaaggtgggggaacagctgaccagctctatgttggcgctgcaggcggagaaagagcgc
ctgatgcgatctgcgagtgaaaaagaggccgagctgtcgtccctgagccaggctgcacag
ctgcagcagtcttccctgcagcaggagagagatcggagcaccagggagctgggagagctg
cagggcaagctgcaggagaagtcaagacgtgaggtgcagttgcagcagaagctgctggag
gagcagttctccctgctgcagggaacggtctctgaggctgagtacatcattcaggacgct
gttgccaagctggacgaccccctgcatatccgctgcaccagctccccagattacctggtc
agtcgggcagaggccactttgggctccattgacaaagtgaaaaaaggtcactccgactac
ctgaagaacatgggagatgctggtaggctactaagggccctgaccaacttctcccacctg
gctgctgacaccatcatcaacggcagtgccacagcacacttggctcccactgaccacgcc
gaccgtctgacagagaattgcaggggctgtgccactcagagtctgcagttcctgaaggat
ctcaagtccaaggcctcccttcagagggcagacccggcctccattcacatagtggttgaa
aagatcctgaagctgggggaggagctgcgacctaaaggaatggatgtgcgacaggatgag
ctgggagatctggtggacaaggagatggcagccacatcagcagccattgagaaggcagtg
agcagaattgatgaaatgatgaaccaggcccgaatggacacctcaggggtcaaacttgag
gtcaatgagagaatcctctacagctgcacagacctgatgaaggccatccacctgttggtc
ctgacatccaccgacctacagaaggagattgttgagggcggaaggggtgcagccactatt
aaggaattctacgccaggaactcccgttggactgagggactcatctctgcctccaaagct
gtgggatggggagccacgcagatggttgagtctgctgataaggtggtgctgcacactggt
aaatatgaggagctcattgtctgctcccacgagatcgctgccagcacggcacagttggtc
gcatcctccaaggtaaaagcataccgcaacagtacaaaactgacagctctccagcaggct
tctcgccatgtgaacgagatggcagccaacgtggtggcctccaccaagacaggccaggag
cacctggaggacaaggataccatggacttctctggaatgtctctcatcaagctaaaaatg
gaggaaatggagtcacaggtgaaggtgttggagctggagaatcagctgggtaatgagcgt
ctgcgcctgggagagctcaggaagaagcactataatattgcaggtgttccagcagcagac
ctcccagagggcaacggactggacccctcgcttgcccctgttgcaccctcctcacccaaa
tcctccaagcctagtgtcatgaggaaacctgacttggctcagaaacccaacttaccgcct
aaaaatatgtttaggtag
DBGET
integrated database retrieval system
