Oncorhynchus tshawytscha (Chinook salmon): 112233548
Help
Entry
112233548 CDS
T05605
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112233548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112233548
Spliceosome [BR:
otw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
112233548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Terminase_5
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
112233548
NCBI-ProteinID:
XP_024257039
LinkDB
All DBs
Position
LG04:30586709..30594104
Genome browser
AA seq
496 aa
AA seq
DB search
MVSVKRQRELDFEDDEATVPVKVGRSSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSH
INVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDIT
YVLKPTFTRQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPLR
NYFLEEENYCGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKN
FQITKQGDAVDFLSWFMNALHGALGGTKKKPSSLTKVFQGSMRIFSKKLPHPDLPPEEKV
ALLLKEEYQEEMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEKEYK
TYKENFLKRFQLLKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQVT
EKNTTYDLVANVVHDGKPTEGAYRMHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQI
WKRRENEDDTTNHTGA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggtctctgtaaaacggcagagagaacttgactttgaagacgatgaagctacagtgcct
gtgaaagtaggccgttcatctgaggatcgcagaagtcgccactgtccctacctcgacaca
atcaataggagtgtgctggactttgattttgagaagctgtgctccatctcgctctcccac
atcaacgtctatgcttgtctcatctgtgggaaatacttccaaggtagaggtctgaagtcc
catgcctatactcacagtgtgcagttcacccaccatgtgttcctcaatctgcacacactt
aagttctactgtctgccagataactacgagatcattgactcatcgctggaagacatcacg
tatgtactgaagcccacattcaccagacagcacatctctggattggacaagcagggcaag
ctgtatcgagcctatgatggcaccacctatctgcctggtatcgtagggctcaacaacatc
aaggctaatgactacgctaatgtggtgctgcaggccctttccaatgtgcccccactgcgg
aactactttctggaagaggagaattactgcggcatccgtaggccacctggtgacatcatg
ttcctgctggtgcagcgattcggtgagctgatgcgcaagctgtggaacccccggaacttc
aaggcccacgtgtcaccccacgagatgttgcaggctgtagtgctgtgtagcaagaagaac
ttccagatcaccaagcaaggggatgctgtggactttctgtcctggttcatgaatgctctg
catggtgcactgggaggaaccaagaagaaaccttcaagcctcaccaaagtgttccaaggt
tccatgcgtatattctccaagaagcttcctcacccagatttgccaccagaagagaaggtg
gctctgcttttgaaggaggagtaccaggaggagatgtcggagtccaccttcctcttcctg
acccttgaccttcccacagccccactgtacaaggatgagaaggagcagctcatcatccca
caggtccccctcttcaacatcctggccaagtttaacggcaacacagagaaggagtataaa
acctacaaagagaatttcctcaaaaggttccagttgctcaagctgcctccctatctcatc
ttctgcataaagaggttcaccaagaacaacttctttgtggagaagaaccccaccatcgtc
aactttcccatcacgaacgtagaccttcgtgagtacctgacagaagaggcacaggtcaca
gagaagaacaccacctatgacctggtggccaacgtggtgcatgatgggaagcccactgag
ggggcatacagaatgcatgtcctgcatcatggcactgggaagtggtatgagctccaggac
ttgcaggtgacagatatcctgccccagatgatcacactgtcggaggcttacattcagatt
tggaaaagaagagagaacgaagatgacacaactaaccacacaggggcgtga
DBGET
integrated database retrieval system
