Oncorhynchus tshawytscha (Chinook salmon): 112233590
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Entry
112233590 CDS
T05605
Name
(RefSeq) LIM zinc-binding domain-containing Nebulette isoform X14
KO
K25865
nebulette
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112233590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112233590
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112233590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nebulin
SH3_9
SH3_1
LIM
SH3_2
Motif
Other DBs
NCBI-GeneID:
112233590
NCBI-ProteinID:
XP_024257101
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All DBs
Position
LG29:22591948..22711331
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AA seq
372 aa
AA seq
DB search
MNPPCARCGKIVYPTEKVNCLDKNWHKGCFHCEVCKMTLNMKNYKGYDKKPYCNAHYPKQ
SFTIVTDTPENLRLRHQSELQSQVKYKKDFEDSKGRGFSIVSDTPEQQRLRKTQEQISNA
KYHEDFERTRGRGCTPVMEDQSMERMHHRNKLMMSEAAYKGVHPQVVEMDRRPGGIIVDG
SSTLDSTHLARNYLKVWRTDPGSIFDFDPVEDNIQSKSLHRLSERASRLTRQQSQQSVHS
QAQSVSSLASASDLWDKSLSVCSSSSALQSQDRAPVLPGAYHQSAQQQQHGYGYMHQTSM
SSVRSVQSPPSVTMRVYRALYDYSAQDHDEVSFRDGDVIVNAQPIDEGWMYGTVQRTGKS
GMLPANYVECFN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgccgtgcgcgcgctgtgggaaaattgtctatccgacagagaaagtcaactgc
cttgataagaattggcataaaggatgcttccactgcgaggtgtgtaagatgaccctgaac
atgaagaactacaaaggctacgataagaagccctactgcaatgcgcactaccccaagcag
tccttcaccattgtgactgacaccccagagaacctgagactgagacatcagagtgaattg
cagagccaggtgaaatacaaaaaggactttgaggatagcaaaggcagaggcttcagcatt
gtatctgacacaccagagcaacagagactgaggaagacacaggagcagatcagtaatgcg
aaataccacgaggactttgagcggactaggggccgaggctgcaccccagtgatggaggac
caaagcatggagagaatgcaccaccggaacaagctgatgatgagcgaggcagcctacaag
ggagtgcacccacaggtggtggagatggacaggagacctggaggcatcatcgtagacgga
agctccacattggactctactcacctggcccgaaactaccttaaggtgtggcggacggac
ccaggctcaatctttgactttgaccctgtggaggataacattcagtctaaaagtctccac
agactgtctgagcgtgcgagccgcctcacccggcagcagtctcagcagtcggtgcactcg
caggcccagtccgtgagttcactggcctctgcctctgacctgtgggacaaaagcctgtct
gtctgcagcagcagctccgcactgcagtcccaggacagagctcctgtgctacctggggcg
taccatcagagtgctcagcagcagcagcatgggtatggctacatgcaccagaccagcatg
tcctctgtgaggtctgtgcagtcccccccatctgtcaccatgagagtgtaccgggcactg
tacgactactcagcgcaggaccacgacgaggtgtccttccgcgatggtgacgtcatcgtc
aacgctcagcccatcgacgagggctggatgtacggcaccgtgcagaggaccggcaaatca
ggcatgctccccgccaactacgtggagtgcttcaactaa
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