Oncorhynchus tshawytscha (Chinook salmon): 112233603
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Entry
112233603 CDS
T05605
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112233603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112233603
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112233603
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
CheX
Motif
Other DBs
NCBI-GeneID:
112233603
NCBI-ProteinID:
XP_042164837
LinkDB
All DBs
Position
LG29:22998213..23103722
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AA seq
1949 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPPDSKSD
SSTLPPIKSKTSFVEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSGPDSAA
PGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYNI
YLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKISWSLASRKRDRQLQEAKQMERE
KHRQHSPVTQQQEQEQDSPQLQQHTYPTAKGLPREANGPTTPSTPTPTSTPSTPSTSTPD
PASKGSTAGAGDPQEGQGAMEESQGATEEEQALQGEPGAVYENTNPVNGSEFSTAENRQT
EADQPTGLGAAQHDQEAVEEGEEPNYEEKPQEIVQSILQEVVNTVVGDAMESAGETELPT
EVTEPAKVINEVITKATAITEMVEDEGDSENVHANGIPGTPISASFPPSLPDDRLSVSSN
DTQESGATTGPVPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQ
LLLSILQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFKTH
LKMQIEVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQGVVDIYVNYDCDLNAANI
FERLVNDLSKIAQGRAGHELGTTPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQT
SLGQEKPSEQETNETKAPETINQYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQ
KEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRF
NKEVMYAYVDQMDFQGKDFVYALRTFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTEF
ASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIA
GKKIAMKGTKEMTLKSNKHSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSAT
HLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVAFLCLEGIRFAIRIACIFTIQLERDAYI
QALARFTLLTASSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQLI
GTGVKARYISGTVRGKEGFISSTKEQSNDEYLGLAGGTVDRKQILSIQESIGETSSQSVV
VAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRL
QWSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEH
IMKKNRSPTIRDMVVRCIAQMVNSQAGNIRSGWKNIFSVFHLAASDQDESIVELAFQTTG
HISMNVFEKHFPATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSDRPQAFK
DYTSDDMNVVPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKH
WWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAISDVFTQYFETLSDVLLDDIL
SQLYWCVQQDNEQLARSGTNCLENVVILNGEKFTPETWDKTCNCMLDIFKTTIPHALLTW
RLAGAEGDPMTPQDVSDKQLDSISQKSVDIQSRSEDQHSMNSAERIAMETRRQSQYSAGM
CEDSPRTRTPTKIQEQRLFSGLLIKCVVQLELIQTIDNMVFFPATSRKEDAENLAAAQRD
ALDAADVRVETQDQGMYRYLTSEQLFKLLDCLLESHRFAKAFNSSNEQRTTLWKAGFKGK
SKPNLLKQETSSLACGLRILFRMYTDDSRQTAWEEVQRQLLNVCSEAVAYFLTLTSESHR
EAWTNLLLLFLTKVLKISDDRFKAHASRYYPLLCEIMQVDLIPELRAVLRKFYLRIGIVF
QIAQLPGPPAEPEPELEVEVEGEPGEEAQ
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaggcaaaaagacgaaaaacatgtttttaaccagagctttggagaagatcctg
gccgacaaagaggttaaaaaggctcaccattcgcaattgcgaaaagcctgcgaggtggca
ctcgaggaaataaaggaagagtctgaaaaattaagtcctcctccagacagcaaatcagat
tctagcactcttccgccaatcaaatcaaagaccagcttcgtcgaggccgacaagtacttc
ctgccgtttgagttggcatgtcagtccaaatgtccccgcatcgtcatcacatcactagac
tgtttgcagaagctgatagcgtacggccacctgacaggcagcggtccagacagcgcggcc
ccgggcaagaagctcatcgacaggatcatcgagaccatctgcggctgcttccagggacca
cagacagatgagggggtgcagctacagatcattaaggccctgttgacggcggtgacctcc
cagcacatagagattcacgagggcacggtgctgcaggcggtcaggacctgctacaacatc
tacctagccagcaagaacctcatcaaccagaccacagccaaggccacactcactcagatg
ctcaacgtcatcttcgcccgcatggagaaccaggcacttacaaatcacaagatatcttgg
tctctggcttccagaaaacgtgaccgccagctccaggaggccaagcagatggagagggag
aagcaccggcagcactccccagtcacccagcaacaggaacaggaacaagactcgccccag
ctccagcagcacacctatcccacagccaagggccttcctcgggaggccaacggccccacc
accccctctacacccacgcccacctccaccccctccactccatccacatctacacctgat
ccggcctctaagggcagcacggctggggcaggggacccccaagagggccagggggccatg
gaggagagccagggggccacagaggaggagcaggcattgcagggggaaccgggggcggtt
tatgagaacacgaacccagtgaatggctctgagttcagcacagcagagaaccgccagaca
gaggcagaccagcccacagggttgggtgccgctcagcatgatcaggaagcagtagaggag
ggggaggagcctaactatgaggagaaaccccaggagatcgtccagagcatcctacaagag
gtcgtcaacactgttgttggagatgccatggagtccgctggtgagaccgagctgcccaca
gaggtcacggaacctgctaaggtcatcaatgaggtcatcaccaaggcaacagcgatcaca
gagatggtagaagacgagggggacagcgagaacgtccacgccaatggaatccccggcacg
cccatctctgccagcttccctccgtcgctgcccgatgacaggctgtctgtctcctctaat
gatacacaggagtcgggagcgaccacaggaccagtaccaggtgctaagttctcccacatt
ctccagaaggatgccttcctagtgtttagatcgctctgcaagctgtccatgaagcctctg
tcagatggtcccccagacccaaagtcccacgagctgcgctccaaggtgctgtccctccag
ctgctcctgtccatactgcagaatgctggtcccatcttcaagaccaacgagatgttcatc
aacgccatcaagcagtacctgtgtgtggcactgtctaagaacggtgtctcctctgtccct
gaagtctttgagctctcgctctccatcttcctcactctcctctcccacttcaagacccac
ctcaagatgcagatcgaggtgttcttcaaggagattttcctgtatattctggagacgtca
acaagctcctacgaccataaatggatggttatacagaccctaaccagaatatgtgcagat
gcccagggtgtggtagatatctatgtgaattatgattgtgacttgaatgctgctaatatc
tttgagaggctggtgaatgacctgtcgaagattgcacagggccgggcaggccacgagctc
ggcacaacaccactccaggagttgaccctgaggaagaaaggcctggagtgtctggtgtcc
atcttgaagtgtatggtggagtggagtaaggaccagtatgtcaaccccaactcccagacc
agccttggtcaggagaagccctcggagcaggagaccaatgagacgaaggccccggagacc
atcaaccaatacggaagcatcaactcgctggactccacagcctcgtctggcatcgggagc
tatagtacacagatgtcagggacagacaaccccgagcagtttgaggttctcaaacaacag
aaggagatcatcgagcagggcattgacctgttcaacaagaaaccaaagaggggcatccag
tacctccaggagcaaggtatgctgggaaccaccccggaggacctcgctcagttcctgcac
caggaggagaggctggactcgactcaggtgggtgagttcctgggggacaatgatcgcttc
aataaagaggtcatgtatgcctatgtggaccagatggacttccagggcaaagactttgtc
tacgctctcagaacattcctcgagggcttccgtctcccgggagaggctcagaagatcgac
aggctcatggagaaatttgctgctagatatctagaatgcaatcaggggcaaactgagttt
gcaagtgcagacactgcgtacgtccttgcctactcaatcattatgttgacaacagacctt
catagtccgcaggttaagaacaagatgactaaagaacaatacatcaagatgaacagaggg
atcaacgacagcaaggatctaccggaggagtatctgtcggccatctacgacgagatcgca
gggaagaagatcgctatgaaggggaccaaggaaatgactctgaaatccaacaagcacagt
gtggccagtgagaagcagcggcggctactgtataacgtagagatggagcagatggctaag
acagccaaggccctgatggaggctgtcagtcacgtccaggctcccttcaccagcgccaca
cacctggagcacgtcagacccatgttcaagctggcctggaccccgttcctagcagccttc
agtgtgggcctccaggactgtgatgacactgaggtggcttttctctgtctggagggaata
cgctttgccatccggatagcctgcatcttcaccatacagcttgagcgggatgcgtacatc
caggccctggcacggttcaccctgctcacagccagctctggcatcactgagatgaagcag
aagaatatcgacaccatcaagactctcatcaccgtcgcccacacagacggaaactacctg
ggcaattcctggcacgagataatgaagtgtatcagtcagttggagctggcccagctgatc
gggacgggggtgaaggccaggtacatctcagggacggttcgggggaaagagggcttcatc
agcagcaccaaggagcagagcaacgatgaatacctgggcctggcaggtgggacagtagac
cggaagcagatcctcagtatccaggagtccataggagagaccagctcccagagtgtggtg
gtggctgtggacagaatattcacaggttctaccagactggatggtaatgcaattgtggac
tttgtgcgctggctgtgtgctgtgtctatggatgagctggcctcgcccacacacccccgc
atgttcagcctgcagaagatagtggagatctcctactacaacatgggacgtatcagactg
cagtggtccaggatctgggaggtcattggagaccacttcaacaaggttggatgtaacccc
aatgaggatgtagctatctttgccgtggattctctccggcagctgtccatgaagtttctg
gagaagggagagctggcgaacttcagattccagaaggactttctgaggcctttcgagcac
atcatgaaaaagaacagatcgccaacaatcagggacatggtggtgcgctgtatcgcccag
atggtcaactcacaggcggggaacatccggtcgggctggaagaacatcttctcagtgttc
cacctggctgcctcggaccaggatgagagcatcgtagagctagccttccagacgacgggc
cacatcagcatgaatgtatttgagaagcacttcccagccaccatagactccttccaggat
gcagtcaagtgtctgtctgagttcgcctgcaacgcctccttccccgacaccagcatggag
gccatccgtctcatccgccactgcgccaaatacgtctctgacaggccccaggcattcaaa
gactacaccagcgatgacatgaatgtagtcccagaggaccgggtgtgggtaagggggtgg
ttccccatcctctttgagctgtcctgcatcatcaacaggtgcaaactggacgtcaggacc
aggggtctgacggtgatgtttgaggtgatgaagacctatggacacacctttgagaagcac
tggtggcaggatctgttcaggatcgtcttcaggatctttgacaacatgaagctgcctgag
cagcaaacagagaaagcagagtggatgacgacgacctgtaaccacgcactttacgccatc
tctgacgtgttcacgcagtactttgagactctcagtgacgttctgctggatgacatcctg
tcccaactgtactggtgtgttcagcaagataatgagcagttggctcggtcaggcaccaac
tgtctggagaacgtggtcatcctgaatggagagaagtttactccggagacctgggacaag
acctgtaactgcatgctggacatcttcaagaccaccatcccacacgcactgttgacatgg
agactagcaggagcagagggagatcccatgacaccacaggatgtatcagacaaacagctg
gattcaatttcccagaagtcagtggacatccagtcccgttccgaggaccagcattccatg
aacagtgcggagaggattgccatggagacccggcggcagagtcagtacagcgcaggcatg
tgtgaggacagccccagaacccggactccaacaaagatccaggagcagaggttattctca
ggcttgctcattaagtgtgtagtgcagttggagctgatccagaccatagacaacatggtc
ttcttccctgcaaccagcaggaaagaggatgctgagaacctggctgctgcgcagagagat
gctctggacgcggcagacgtccgtgtcgagactcaggaccaaggaatgtaccgctacctg
acctcagaacagctgtttaagttgctggactgcctgttggagtcccaccgcttcgccaag
gccttcaactctagcaacgagcagaggaccactctatggaaggcaggttttaaagggaag
tcaaagcccaatctgctgaagcaggagaccagcagtctggcgtgtggcctaaggatcctg
ttccggatgtacactgatgacagccgtcagaccgcctgggaggaagtccagagacagctg
cttaatgtgtgcagtgaggcagtagcctacttcctgactctaacatcagagagccacaga
gaagcctggaccaacctgctgctcctcttcctcaccaaggtcctgaagatcagtgacgac
aggttcaaggcccatgcgtccaggtactaccctctgctgtgtgagatcatgcaggttgat
ctaatcccagaactgcgggccgtgctacggaagttctacctacgcatcggcattgtgttc
cagatcgcccagctgcctggaccacctgcagaaccagaaccagagctggaagttgaggtg
gagggggagcctggagaggaagcccagtga
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