Oncorhynchus tshawytscha (Chinook salmon): 112233604
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Entry
112233604 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC112233604
KO
K20686
Rho guanine nucleotide exchange factor 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112233604
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112233604
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_2
SH3_1
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
112233604
NCBI-ProteinID:
XP_042159287
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Position
LG21:complement(33007014..33090767)
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AA seq
1338 aa
AA seq
DB search
MEHTDSPASHSSDPNGFVNKVFNVSLDVQHETGTVSIHETGKGEGQGESQEEGQGPCQAQ
GQWQGDGDRQAETQAPPQTPGMEHPDVNRRPRATGGIWKILTRRKAASELDNRRPHSMIL
PGEEAFIPKLSFADKVRSIKKLRSPGVFKGRVGKMSRSSTKFRDGETEDDSFCRDFLPSP
ALHPGRSTLRHYAKRHSYAGHTAEFDCSFEDMDLTATLDRHHLPSLVDPATQNGSKPTER
VPYTKRSQVQAQAQANHSSNCNTTSAEVCEEQSVRGGPKAPLGGRRSKRADVWSYLRKIS
VLGKGNPAYSERSFDSELHTLDKTMDSDYGSVDIESIRDFQPAATKHSDSKGGHFGGLIK
FFSNVAETARKWRMSSHSFSPPEGGAERTPLDSPRAGQRLGDYVHSVSLTLRSEDHPEFP
PTPASPLTPHPPRSPTCDPASPTPLIGRRSPRVVLKAWRVCPDSPSVNGLVCVSSLETAR
QTDKQTESQPVRQTERQTRHTSVATVENHVPHSRLERETQKETVGDRDHLECLSTVEDRE
REGRERHSGNYLDSEDALPVSDQTHLPNGQSKLREEETAATREPAGNCHQEVFKGALSGS
VLRRPRSVQSYSSPVKTPAPPKPPRPRPRPASALVDLRVCSPFPGGCAFAVTQQATGGSL
CRHRRRPGPMMHLLPPGRRQAGSLARPCSVIEPSVTVETDPAQSHRAMSRPLGASPLEPP
LRVSLQRCHSLPPSSLTTLALFPGHTADSQSSSMCPGDGEAGSCRRRLLRTGSGPLQVNI
LISGGSIVSAEAVWDHVTMADRELAFKAGDVIKVLDASNKDWWWGQIDEEEGWFPASFVR
VEPHPPQPQTKQVFYINPIATARFQNTTSKLWVNQEDGGVEPAEGTSEVANGHLDPTNDC
LCLGSPLQNRDQMRANVINEIMSTERHYIKHLKDICEGYLRQCRKRVDMFNDDQLRVIFG
NIEDIYRFQMGFVRDLEKQYNNEEPHLXDRTLXNMRXIEQTCKLPCFLEHQDGFWIYSEY
CNNHLDACMELSKLMRDGRYQHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELL
KYTPQEHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQASVLDWEGDDILDRSS
ELIYTGEMSWIYQPYGRSQQRVFFLFDHQLVLCKKDLIRRDILYYKGRIDMDRYDVRDAI
DGRDEDFNVSVKNAFKLHNKDSEELHIFLSKKQEEKIRWLRAFHEERKMVQEDEKIGFEI
SEYQKRQAALTVRKVSKQKGVNRCVPPSYPPPQDPLPLGQYDLAKDLAHAEVFELSQSKR
GQAPFWHNNFTRLTPFKK
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggaacacacggacagccccgcctcccacagcagcgaccccaacgggttcgtcaataaa
gtcttcaacgtgtctctggatgtgcagcatgagaccggcactgtatctatccatgagact
gggaagggagagggacagggagagagtcaagaagagggtcagggtccatgccaagcccag
ggacagtggcagggggatggggatagacaggcagagacccaggcaccccctcagacccct
gggatggagcacccggatgtcaaccgtagaccaagagctacaggaggcatctggaagatc
ttgacccggcgaaaagcggcttcagaactggataacagaagacctcactccatgatcctc
ccaggagaggaggcctttatccctaaactgtccttcgctgacaaggtccgctccatcaag
aagctccgctctccgggtgtcttcaaggggagggtgggtaagatgtctaggtccagcact
aagttcagagatggagagacggaggacgactcgttctgccgggacttcctcccctcaccc
gccctgcatcccggtaggagcacactccgccactacgccaagaggcactcgtatgccgga
cataccgccgagttcgactgctcatttgaggacatggatctgacagctaccctggacaga
caccatcttccctcgctagtggaccctgctacccagaacggctctaagcccacagagaga
gtcccctacaccaagagatctcaggtccaggctcaggcgcaggccaatcactcctctaac
tgtaacactacctcagcagaagtgtgtgaggagcagagtgtgaggggcggccccaaggcc
ccgctgggtgggaggaggtctaagagagctgacgtgtggagttacctaaggaagatctct
gtcctggggaaggggaacccagcttactcagagaggagttttgactcagagctacacaca
ctggacaagaccatggactctgactatggctcggtggacattgagagcatccgggacttt
cagccagctgctacaaaacactctgacagcaaaggtggacattttgggggtctgattaag
ttcttcagcaatgttgcagagacggctagaaaatggcggatgtcttctcactccttctct
cctccagaggggggggcggagcggacgccactggactcccccagagcagggcagcgtctg
ggggactacgtccacagtgtgtccctgaccctccgcagtgaggaccatccagagtttccc
ccaacacccgcctcacccctgacccctcacccccctcgctcccctacttgtgaccctgcc
tcacccactcctctgataggcagacggtctcctcgagtggtgctgaaggcctggagagta
tgtccggactcaccaagcgttaacggcctggtgtgtgtgagctcattggaaacggccaga
cagacagacaaacagacagagagccagccagtcagacagacagagagacagacacggcac
acctctgtagccacagtagagaatcatgtgccacactcaaggctggagagagagactcag
aaagagacagtgggagacagagaccacttagaatgtctgtctacagtggaagacagagaa
agagagggaagagagcgacactcaggaaattatctggattccgaggatgctctacctgtc
tcggatcagacacaccttccaaacggccaatcaaagttacgggaagaagagaccgcagcc
actagggagccagcaggaaactgccaccaggaagtatttaagggagctctatcaggcagt
gttttgaggagacccaggtcagtccagtcctattctagtccagtgaagacccctgcccct
cccaagcccccccgccctcgcccccgtcccgcctcagcactggtcgacctccgagtctgc
agtcccttcccagggggctgtgcgtttgccgttactcagcaggccacagggggctctctg
tgccggcacagacgcaggcccggtcccatgatgcacctcttgccgccgggtcggagacag
gcgggcagtctggccagaccatgctctgtcatagagccctctgttaccgtggagacagac
cccgcgcagagtcacagagccatgtctcgtcccctgggggcatcacctttagagcccccc
ctcagagtgtctcttcagaggtgtcactccctcccccccagcagtcttaccactctggcc
ctgtttccgggacacacagcagactcccagtcatcctcaatgtgtcctggtgatggagag
gctggcagctgcaggaggagactgctcagaacaggctctggtccactacaagtcaacatt
ttgataagtggaggatctatcgtcagcgctgaggcagtatgggaccatgtgaccatggcc
gaccgagagttggcgtttaaggccggtgatgtcatcaaggtgctggacgcgtccaataag
gactggtggtggggtcagattgacgaggaggaggggtggttccccgccagcttcgtacgg
gtcgaaccccaccctcctcaaccccaaacaaaacaggttttctatatcaaccccatagca
actgctcggttccaaaacactacgtctaagctgtgggtgaaccaggaggatgggggggtg
gagcctgcggaggggaccagtgaagtggctaacggtcacctggatccgaccaatgactgc
ttgtgcctgggttcgccacttcagaaccgtgaccagatgagagccaacgtcattaatgag
atcatgagcacagagagacactacatcaaacacctcaaggacatctgtgagggctacctg
cgccagtgtaggaagagggtagacatgtttaacgatgaccagctgagggtgatctttggg
aacatcgaggacatctaccgtttccagatgggcttcgttagagacctggagaaacaatac
aacaacgaggaaccacacctgtgagataggaccctctagaacatgagatagatagaacag
acatgtaagttaccctgctttctagaacatcaagatggcttctggatctactctgagtac
tgtaacaaccacctggacgcctgcatggagctgtccaagctgatgagagacgggaggtac
cagcacttcttcgaggcctgtcgtctgctgcagcagatgatcgacatcgctatcgacgga
ttcctcctcacacccgtacagaagatctgcaaataccccctgcagctggccgagctgctc
aaatacaccccacaggaacacagtgactatcgctacgtggcggcagcgctggcggtgatg
cgtaacgtcactcagcagatcaacgagaggaagaggaggctggagaacattgacaagatc
gcccaatggcaggcctccgttctggactgggagggtgatgacatcctggaccggagctcg
gagttgatctatacaggagaaatgtcttggatctaccagccttatggacgcagtcagcaa
cgggtcttcttcctctttgatcaccagctggtcctctgtaagaaggacctgattcgtagg
gacatcctgtactataagggccgtatcgacatggaccgctatgacgtgcgggacgccatc
gatggtcgtgacgaagacttcaacgtgagcgtgaagaacgcattcaaattgcacaacaaa
gacagcgaggagctccacatcttcctgtccaagaaacaggaggagaagatacgatggctc
cgggctttccacgaggagaggaagatggtgcaggaggatgagaaaatcgggtttgagatc
tcagagtaccagaagcgtcaggcagccctgactgtgaggaaggtatctaaacagaaaggt
gtgaacaggtgcgtgcccccctcctacccccctccccaggatcccctacccctgggacag
tatgacctagcaaaggacttggcacatgcagaggtttttgaattgagtcaatccaaacga
ggccaggctcctttctggcacaacaattttactagattaacaccttttaagaaatag
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