Oncorhynchus tshawytscha (Chinook salmon): 112233612
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Entry
112233612 CDS
T05605
Name
(RefSeq) tripartite motif-containing protein 55-like isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112233612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112233612
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112233612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-B_box
zf-C3HC4_4
zf-RING_6
Sina_RING
AIP3
CC_BshC
Zn_ribbon_FGT1_2
Golgin_A5
zf-RING_11
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
112233612
NCBI-ProteinID:
XP_024257130
UniProt:
A0A8C8C4C3
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All DBs
Position
LG29:complement(23299646..23308748)
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AA seq
350 aa
AA seq
DB search
MDNLEKQLICPICLETFTKPVVILPCQHNLCRKCANDIFQASNPYLPTRGGSVTSGGRFR
CPSCRHEVVLDRHGVYGLQRNLLVENIIDMFKQESTSSAKPAAPERTEEQAMCHEHKEEK
INIYCVTHSVPTCSMCKVFGAHQDCEVAPLKSMYQTQKTELTDGIAMMVGNNDRIQGIIS
QLKETCRTIEENGRRQKSQLCEKFDHLYAILEERKRDLSSKVVAEQEEKLNYIRGLTKKY
KEHLEQSCKTVETGIQTLEEPEMAVFLQTVKDLLKRTGEALSTSHLEKVELGYEAMDHYT
VNFWREGRALRSIDFISDDEDEYEEVDGGKAEAEVGGGASTAAPLPSPAH
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacaatttggagaagcagttgatttgtcccatctgcctggaaacatttaccaaacca
gtggtcattttaccgtgtcaacacaacctgtgtagaaagtgtgccaatgatatctttcag
gcctccaacccatacctcccaaccagaggggggtcagtgacctccggtggccgtttccgg
tgcccgtcctgcaggcacgaggtggtcctggaccgccatggggtctacgggctccagagg
aacctgctggtggagaacatcatcgacatgttcaaacaggagtccaccagcagcgccaag
ccagcggccccagagaggacagaggagcaggccatgtgccacgagcacaaggaggagaag
atcaacatctactgtgtgacccacagcgttcccacctgctccatgtgcaaggtgtttgga
gcccaccaggactgtgaggtggcgccgctcaaaagcatgtaccagacacagaagacggag
ttgactgacgggatagcgatgatggtggggaacaacgacaggatccagggcatcatcagt
cagttaaaggagacctgccggaccatagaggagaatggcaggaggcagaagtcccagctg
tgtgagaagtttgaccatctgtacgccatcttggaggagaggaagagggacttaagttct
aaggtggtggctgagcaggaagagaagctcaactacattcgtggtctaaccaagaagtac
aaagagcacctggagcagagctgtaagaccgtagagacaggcatacagaccttggaggaa
ccagagatggctgtcttcctacagactgtaaaagacctccttaaaaggactggggaggcg
ttgagtacctcccacctggagaaggtggagcttggatatgaggcgatggatcactacacc
gttaacttctggagagagggcagggccctgcgtagcattgacttcatctcagatgacgaa
gatgagtatgaggaggtagatgggggaaaggcagaggctgaagtaggaggtggagcctca
acagctgccccactcccatcccccgcccattaa
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