Oncorhynchus tshawytscha (Chinook salmon): 112233830
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Entry
112233830 CDS
T05605
Name
(RefSeq) thyroid receptor-interacting protein 6-like isoform X1
KO
K12792
thyroid receptor-interacting protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112233830
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Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
112233830
NCBI-ProteinID:
XP_024257472
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All DBs
Position
LG15:21936308..21941896
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AA seq
574 aa
AA seq
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MSGPNWLPPKTPGSPERPVPQMSDSGPAVNRQPPKKVSSDTRPKYVVYDQNGGGGMATRY
LATSPTAGPMQHHHQEDPGFHPKSNDHYYQPPPQGLEEDQSLNLHMERYQLMHWVTPEKL
IRHHSSSDAEIDSLACMLADQDSHALNGTQLYHNVPYNKYILGDHYRPSAQTRAPSQGEP
FMCFPPQSTDHSTPPNPSDPHQGLQYFPQPDDNDTQVSKSYPQPVPASYNTASTHTGPRF
SLQVKTAQTVTYFQTGRQAGQAYTPPPHRQHALWSLPRNQTGPHGWFPPHPASQVQELHS
ERGYKGSAAGFGGSATQCPTSNGVTETHQSGSAPSYAYQPSKQGTAALRPEEELGQPTKK
FVYDMNHPPTEEDFGCCARCGDKVLDDGSDCITMEQVFHVDCFTCVTCQAHLRGQPFYAI
DKQSHCRSCYISVLERCCMCSKPILDRVLWSMGNAYHPRCFNCVVCGCCLDGVPFTVDAT
SQIHCIDDFHRKFAPRCSVCGQAIIPGPGQDETVSIVALDRNFHVNCYVCEECGLLLSSE
GEERCCYPLDGHILCKGCSAQHTLNPSAKISTDC
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcctaactggctgcctccgaagactccgggtagcccggagagacccgtcccc
cagatgtccgactctggaccagccgtgaacagacagccgcccaagaaggtctcctcggac
acccggcccaagtatgtggtctatgaccagaacggaggaggaggaatggccactaggtac
ttggctactagtcccacagctgggcccatgcagcaccaccaccaagaggacccagggttt
caccctaaatctaatgaccactactaccaaccacctccccaagggcttgaagaagaccaa
tccttgaaccttcacatggaacgctaccagctgatgcactgggtaactcctgagaagctg
attagacaccactccagcagtgatgcggagattgactcactcgcctgcatgctggctgat
caggacagccatgcactaaacggcacacagctgtaccacaatgtgccttacaacaaatac
atcttgggggaccactacagaccctcagcccagacaagagccccatctcagggagagccg
tttatgtgtttcccacctcagtccacggaccattctacacccccgaaccccagtgatccc
caccagggtctccagtacttcccccagccagatgacaatgacacccaggtctccaaatcc
tacccccagcctgtccctgcctcctacaataccgcctccacccatactggcccaaggttc
agtcttcaggtcaaaacagcccaaactgtcacctacttccagactggtaggcaagctggg
caggcttacactcctcccccacaccgccagcatgcattgtggtccctgcccaggaatcag
actggcccccatggctggttccctccccaccctgcatcccaagtccaggagctgcactct
gagaggggttacaaggggagtgctgcaggttttggagggagtgctacccagtgccccaca
tccaatggagtcacagaaactcaccagtcaggctcggcaccaagctacgcctatcagccc
agcaagcaggggacagcagctctgaggccagaggaagagttgggccagcccactaagaag
tttgtgtatgacatgaatcatcccccgacagaggaagactttggttgctgtgcacgttgc
ggcgacaaagtccttgacgacggcagcgactgtatcaccatggagcaggtgtttcatgtg
gattgtttcacctgtgtcacctgccaggctcatctccgggggcaaccgttctacgctatt
gacaagcagagccactgcaggagctgttacattagtgtcctagagcgctgctgcatgtgc
tccaagcccatcctggaccgtgtcctgtggtccatgggcaatgcctaccacccgcgctgc
ttcaactgtgttgtgtgtggttgctgcctggacggcgtgcccttcaccgtggacgccacc
tcccagatccactgtatagacgacttccacaggaagtttgcccctcgctgctcagtgtgt
ggccaggccatcattcctggaccgggccaggatgagacggtcagtatagtggcactggac
cgtaacttccacgtcaactgctatgtgtgtgaggagtgtggcctgctcctgtcctctgag
ggtgaggagcgatgctgttaccccctggacggtcacatcttgtgtaagggctgcagcgcc
cagcacaccctgaacccctcagccaaaatttcaactgactgctaa
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