Oncorhynchus tshawytscha (Chinook salmon): 112233860
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Entry
112233860 CDS
T05605
Name
(RefSeq) arf-GAP domain and FG repeat-containing protein 2 isoform X1
KO
K15044
Arf-GAP domain and FG repeats-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112233860
04131 Membrane trafficking [BR:
otw04131
]
112233860
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112233860
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112233860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Motif
Other DBs
NCBI-GeneID:
112233860
NCBI-ProteinID:
XP_042154241
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All DBs
Position
LG15:complement(21801829..21823507)
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AA seq
474 aa
AA seq
DB search
MSNRKHRDNQEICARKVRELAQAGVNKHCFECSQPGVTYIDITVGCFVCTSCSGMLRGLN
PPHRVKSISMTTFSQQEVEFLQNHGNEVGRRTWLCVFEPKTDACFNTRDSQKLKEFLQDK
YEKKKWHFSKNKSRREVEGPWSPPGVQALPSSHGPPPAQAPSHAMPPSARPIRTLSQSQL
SSWGDRVPTISPADMRADVFTARAPSRSQSFRDPPMKESLLRGIERQRPGSLSSTMGPQS
HTPSFPALPRPSGRTVSSSGGLAPFRAFPKSLSVDFGGLSQQQSHSALSITPPAPGPNTH
TNHQDRYAALSQLNSVFSDTSPGPTAPPGGLPQYSTLFGNRLSSSSTPASSPGVDAVSGS
QTFASFPNPFSSSSNSQQQQPALSPSNPFNRSTSGGDSSGFVSSPTSVFPPSATFPTPAT
QNAFPHKHANNQEANGFASFPASDSQPKVPRPMSVNPFTGNVYPSRGTSRNPFI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccgaaaacatcgggacaaccaagagatatgcgcccgcaaggtccgggagttg
gcccaggctggagtaaacaaacactgcttcgagtgcagtcaacccggggtgacttacatc
gatatcaccgtgggctgcttcgtttgcacgtcgtgctctggaatgctgagaggactcaac
cctccccacagagtcaagtctatctccatgacaaccttctcccaacaggaagtggagttt
ctgcaaaaccatggcaatgaggtggggaggaggacctggctgtgtgtctttgagccaaag
acagatgcatgcttcaacacaagggactcacagaagctcaaggagttcctccaggacaaa
tacgagaagaagaaatggcatttttcgaagaacaagagccggagggaggtggagggaccc
tggagcccgccgggggtgcaggccttaccctcctctcacggccccccgcccgcccaggcc
ccatcccacgccatgcccccctccgccagacccatacgcacactgtcccagtcccagctc
tcgtcctggggggacagagtccccaccatctcccctgcggacatgagggctgatgtgttt
accgcccgcgctccctcacgctcccagagctttagagaccccccaatgaaagagtctcta
ctgagaggtatagagagacaacgtccaggctctctctcttcaacgatgggaccccagagc
cacaccccctcctttcctgccctccctcgaccctcaggtcgcacagtgtcctcctcgggg
ggcttagcccccttcagagccttccctaagtctctgagtgtggattttggggggctcagc
cagcagcagagtcacagtgccctcagcatcacccccccagcccccggcccaaacacacac
acaaaccaccaggaccgctacgctgccctgtcccaactaaacagtgtcttctctgacacg
tcgcctggacctacagcaccccccggtggactaccccagtatagcaccctatttgggaac
cgcctgtcctccagttccactcctgccagctctccaggcgtggatgctgtgtcgggatct
caaacatttgcaagcttccccaacccgttcagctccagttccaactctcagcagcaacag
cctgccctgtcccccagtaacccattcaacaggtccacctcaggaggtgactccagtggg
ttcgtcagctctccaacctcagtgttccctccgtccgccaccttcccaactccggctacc
cagaatgcatttccacacaagcatgccaacaaccaggaagccaatggttttgcctctttc
ccggcatcggactctcaacccaaagttcctcgtccaatgtcagtgaacccattcactggg
aatgtttacccgagtagaggaacgtcgcgaaaccctttcatctga
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