Oncorhynchus tshawytscha (Chinook salmon): 112233945
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Entry
112233945 CDS
T05605
Name
(RefSeq) calcium-activated chloride channel regulator 1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112233945
Ion channels [BR:
otw04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
112233945
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Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA_2
VWA
fn3
Y_Y_Y
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
112233945
NCBI-ProteinID:
XP_024257629
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Position
LG05:75010915..75028083
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AA seq
908 aa
AA seq
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MASKAASVLLLVYLSGSTFGIKLTGNGYTDILIAINPEVPEDPVLITQIEEMFKEASRHL
LNATKKHLYFKEVAILVPPNWNKGNYSKAKTEVYDKANIIIDEPNKLHGDQPYTLQYGEC
GSEGRYIHLTPDFMLNDDVSKYYGPRGKVFVHEWAHLRWGVFDEYNEEKPFYLSGSIIEA
TRCTINITGKYIHKRDQRDCTTDPVTGLYTEDCVFYPDKQQTTSASIMYNQGLSAVKEFC
TKETHNTEAPNIQNRLCGNIGVEEVITSLSVDASVAVVPTPPSILPTFTVVQCRQRVVCL
VLDVSGSMAAGSRMLNLKQAATLFIQKIVEDQAYIGIVQFTATATIREPLTLIDGEASRD
KLVGRLPLSAGGGTDICAGVKKGLEVLGGDGDGAIGDAIILLTDGESSINCQKRVNESGA
TVHTITLGPNANIDVKELSDISGGKYHNAADGVDSNDLVDIFASHTTSDGNLTKQTIQLE
STGLNMIGWFNGSVSIDRTIGNKTSFLVIYERSPPDILVLSPFTRTYDTSHFKHDAPAKT
LTLDIEGTAETGKWKYSLLNKESTAQSMSMTVTSRAVSDAIPPVMVKTHMSQQSSNGSKP
MLVYAEVNQKGVPVILADVMATLKSDSGDEYQLQLLDNGAGADAFRNDGIYSSYFTELTT
GKYSLKVKVHNNDGMARFSLRRHSGALYIPGYVVNGQVVMNPPKPPVSEDDLQADVGSFT
RTVIGESFSVLLPPGVPPPNFPPNKITDLNAEIEEDKVLLTWTAPGEDMDQGTATAYEIR
FSEDSGLLRSNFSTAHLVTYDLSPKKAGSPEKLSFTLFSIIKNGTTLFFAAKAEDKSFLK
SETSNIIQVTKIVPKAPVPSPTDAPDTSGSGVNITAIVISVTTVTMVACLIASVTMCSIK
SRRVINHA
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagcagcatctgtgttgctgctggtttacctgtcaggatctacatttggg
atcaagctgactggaaatggatacactgacattctgattgctattaaccctgaggtgcct
gaggaccctgtgctcatcacacaaatcgaggaaatgtttaaagaagcctccagacatcta
ctcaatgcaacaaagaaacatttatatttcaaggaagtcgcaatattagtgccacctaat
tggaataaaggaaattactccaaagcaaagacggaggtctacgataaggccaatataata
attgatgagccaaataaattacatggagatcagccttacactctgcagtatggtgaatgt
ggatctgagggccggtacattcatttgactcctgacttcatgctgaatgatgatgtctct
aaatactatggacccagaggtaaggtttttgtccatgaatgggcacatctaagatgggga
gtttttgatgaatataatgaagaaaaaccattctacctgtcaggttccataatcgaggca
acaagatgtaccataaacattacaggaaagtacatccacaaacgtgaccaaagggactgc
accactgaccctgttactgggttatacaccgaagactgtgtattctaccctgacaagcaa
cagacaacctctgcatctatcatgtacaatcaaggccttagtgctgtaaaagagttctgt
acaaaagaaactcacaacactgaggctccaaacatccagaacagactgtgtggtaacata
ggtgtagaggaagttatcacttcactttctgtagatgccagtgtggcagttgtgccaaca
ccaccaagtatactacccacattcactgtggtgcagtgccggcaaagggttgtctgtctt
gtccttgatgtttcaggaagcatggctgcaggttctagaatgttgaacctgaaacaagcg
gcaacactctttatacagaagattgttgaagaccaagcttatattggcattgtacaattt
acagctacggctacaattcgtgaaccattgactttaattgatggtgaagcgtcgagagat
aagcttgtaggcagactgccactatcagctggtggaggcacagacatttgtgcaggtgtt
aagaaaggtctggaggtacttgggggagatggagatggtgcaataggagatgcaatcata
ttactaactgatggggaatcaagtatcaactgtcaaaaaagggttaatgaaagtggtgca
actgtgcacacaataactcttgggccaaatgcaaacatagatgtaaaagaattgtcagac
atatcaggtggtaaatatcacaatgctgctgatggtgtggattccaatgaccttgtggat
atttttgcttcacacacaacatctgatggaaatctgaccaagcagacaatccagcttgag
agcactggattgaatatgattggttggtttaatggatctgtatccattgacaggacaatt
ggaaacaagacaagctttttagttatctatgaaagaagtccacctgacatccttgtttta
agcccctttacacggacctatgacacatcacatttcaaacatgatgctcctgctaagact
ttaacgctcgatattgaaggaactgctgagactggaaagtggaaatacagcctgctaaat
aaagagtcaactgcccaatctatgtcaatgactgtgacaagtcgtgctgtcagtgacgct
ataccaccggtcatggtcaaaacccacatgagccaacagtccagcaacggcagcaaaccc
atgttggtgtatgcagaggtcaaccagaaaggtgttccagtgattctggcagatgtgatg
gccacactgaagtctgattctggggacgaatatcagctacaactgctggataatggagca
ggtgctgatgctttcagaaatgatggcatctattccagttacttcactgaactaacaaca
ggaaaatacagcttgaaagtgaaagtacataacaatgatggcatggccagattctccctc
aggagacacagtggagcactttacatacctggatatgtggttaatggacaagtggtgatg
aatcccccaaagcccccagtcagtgaggatgacctgcaggctgatgtgggcagcttcacc
aggacagtcataggagagagcttctcagtccttctcccacctggtgtcccccctccaaat
ttcccccctaacaaaatcacagacctgaatgcagagatagaggaggacaaagtgctgctc
acctggactgcacctggggaagacatggaccaaggcacagcaacggcctatgagattcgt
tttagtgaagattcgggcctactcagatccaacttcagtaccgctcatcttgtcacatac
gacctctcaccaaagaaggcaggctccccagaaaagctctcatttactctcttctcaatc
atcaaaaatggcaccactctgttctttgcagcaaaagcagaagacaaatctttcctgaaa
tctgaaacatccaacattattcaagtgaccaagattgttcccaaagctcctgttccttct
ccaactgatgcgcctgatacatcaggcagtggtgtgaacattactgctatagtcatatca
gtcaccacagtaacaatggtggcttgtctgattgctagtgtgacaatgtgttcaattaaa
tcaaggagagttattaatcatgcttaa
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