KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112234008
Entry
112234008         CDS       T05605                                 
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112234008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    112234008
   03400 DNA repair and recombination proteins [BR:otw03400]
    112234008
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     112234008
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112234008
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 PTPlike_phytase
Other DBs
NCBI-GeneID: 112234008
NCBI-ProteinID: XP_042152028
LinkDB
Position
LG13:61551628..61564040
AA seq 780 aa
MATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQEAVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQNRVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKSRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADTKLRE
EEKRAVRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETDKLHLMFSLM
DKVPSGIEPMLKDLEDHIMNAGLADMVAAAETITSDSEKYVEQLLTLFNRFSKLVKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTT
LSKKLTSEEIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSDDLNQVFKEMHKHNKLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEDFYKRNHSGRKLHWHHLMSNGIITFKNEMGHYDLEVTTFQL
AVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYEPSVSSPKDF
TDSTLFYVNQDFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII
QIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFIYMA
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttgttaaagaataaaggctccttgcagtttgaggacaagtgggac
ttgatgaggcccattgttctcaagctgctgagacaggaggctgtcaccaagcagcagtgg
ttcgacctcttctcagacgtccatgctgtgtgtctgtgggatgataagggcccagctaag
atccaccaggccctcaaagaagacatcctagacttcatcaaacaagctcagaaccgtgtg
ttgagtcaccaggatgacacagcgttgctgaaggcctacattgtggagtggcgaaagttc
ttcacgcagtgtgacatcctgcccaaacccttctgtcagctggagatcacactgatgggg
aagcagggcagcaacaagaagtctaacgttgaggacagcatcgtacgcaagttgatgttg
gacacatggaacgagtcaatcttctccaacataaagagccgtcttcaggacagtgctatg
aagctggttcatgctgagaggctgggagaggcttttgactcccagctggttataggagta
cgagaatcatacgtcaacctgtgctctaaccctgaagacaagctccagatctacagagat
aactttgagaaggcctacctggactcaactgagaggttctacagaacacaggccccatca
tacctacagcagaacggagtccagaactacatgaaatatgcagacacaaagctaagagaa
gaggagaagagggcagttcgataccttgagactcgtcgtgaatgtaactctgtccaagct
ctgatggaatgttgtgtgaacgctctggtgacgtcgtttaaagaaaccatcctggctgaa
tgtcccggcatgatcaaacgcaatgagacagacaagctccacctgatgttttccctgatg
gataaggttcctagtgggatagagcccatgctgaaagatctggaggatcacatcatgaac
gctgggctggctgatatggtggctgctgcagagactatcacttctgactctgagaagtac
gtggagcagctgctgacattgtttaaccgtttcagtaaactggtgaaggaggcctttcag
gatgaccctcgattcctcaccgccagagacaaggcctacaaagctgtggtgaacgatgcc
accatttttaaactggagctgcccctcaaacagaaaggggtaggtctgaagacccagcca
gagtcgaagtgtccagagctgctagctaactactgtgacatgctgctgaggaaaacaacc
ctgagcaagaaactcacatcagaggagatagaactcaaactcaaagaagtgttgctggta
ttgaagtatgttcagaataaggatgtgtttatgaggtaccataaagcccacctgaccaga
agactgatcctggacatctcagccgacagtgaaatagaagagaacatggtggagtggctc
agggaggtggggatgcctgcagactatgtgaataagctggcgaggatgttccaggacatt
aaagtatcggatgatctcaaccaggtcttcaaggagatgcacaaacacaacaagctggct
ttaccagctgacagtgtgaatataaagatcctgaatgcgggtgcttggtcgaggagcagt
gagaaggtgtttgtgtctctgcctactgagctggaggatctgatcccagaggtagaagac
ttctacaagaggaaccacagcggaaggaaactacactggcaccacctcatgtccaatggc
atcatcaccttcaagaacgaaatgggtcattatgacctggaggtcacaacctttcagctg
gctgtcctatttgcctggaaccagcggccgcgggagcgaatcagcttcgagaaccttaaa
ttggccaccgagcttcccgatgccgagctacgacgcacactctggtctctggtagcgttc
cctaaactgaagagacaggtgttgtcctatgagccttcagtctcctcccctaaagacttc
acagacagcaccctgttctatgtcaaccaggacttttctctcattaaaaactccaaggtc
caaaaaaggggcaagattaatctgattggtcgattgcagctgaccacagagcgaatgaga
gaggaggagaatgagggcatcgtccagctgagaatattaagaacccaggaggccatcatc
cagattatgaagatgaggaagaggatcagtaatgctcagctacagacagaactggtagag
atcctcaagaacatgttcctgccccagaagaagatgatcaaggaacagattgagtggctc
atcgaacacaaatacatcaaacgggacgagacagacatcaacacctttatctacatggca
tag

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