Oncorhynchus tshawytscha (Chinook salmon): 112234033
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Entry
112234033 CDS
T05605
Name
(RefSeq) prolactin regulatory element-binding protein isoform X3
KO
K14003
prolactin regulatory element-binding protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112234033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112234033
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112234033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
EIF3I
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
VPS11_N
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
112234033
NCBI-ProteinID:
XP_024257772
LinkDB
All DBs
Position
LG03:29207637..29217328
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AA seq
426 aa
AA seq
DB search
MGKWRMPDLYRAPFPLYTIKVDPKTGWVITAGGGGASKTGIKNAVHFLGLELVGDQHCAT
LVHSHDTDTRATMNLAIGGDVIAAGQDGRCSLMRFRQRQTRGKAAAGGGSEQGAARRRAG
KGGKGSEGAAAARSNVSEMKDNTTQISVDTFGEVQSDLNPQDPLQKCVRFSPDLSLLLTG
GTDGHIRVWEYPSLKEKLDFKAHEGEIEDLDISPNNKHLVTVGRDFACSIWSGNQLAMNL
CWHEKMPQIAAKSYRYMACRFGKVEDQKDNMRLYTVQIPHKRDRKPPQCYLSKWDGQNFL
PMLTNPCGTEVISTLAVSDSGTFLGLGTVTGSVAIYIAFSLQKLYYVQESHGIVVTDLAF
LPDTPKGQSLKGNNEAAMLSVAVDCRCQMHTVRNRRSFPIWLVLFFCGLMVVGAVLLLQH
LFPGFI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatggaggatgccagacctgtatagggcccccttccccctctacacaatcaaa
gtcgaccccaaaacaggatgggtgatcactgcaggagggggaggtgcttccaagacgggc
ataaagaatgcagtgcacttcctgggtttggagttggtaggagaccagcactgtgccacc
ctggtgcactctcatgacacagacacgcgtgccaccatgaacctggcaataggtggggat
gtgatcgccgcagggcaggacggcagatgcagcctcatgcgcttcagacaacgccagacc
aggggcaaggccgcagcagggggtggcagtgagcagggcgcagctaggagacgagctggg
aaagggggtaagggtagtgagggagctgctgctgctaggagcaatgtgtccgagatgaag
gataacaccacccagatctctgttgacacgtttggggaggtgcagtcggacctcaacccc
caggaccccctccagaagtgtgtgaggttcagtcccgatctcagcctcctactgactggc
ggaacagacggacacatcagagtgtgggaatacccctccttaaaagagaagttggacttc
aaagcccatgagggggaaattgaagacttggacatcagtccgaataacaagcaccttgtg
acagtgggccgggactttgcctgcagtatatggagtggcaaccagctggccatgaacctc
tgttggcatgagaagatgcctcagatagcagcaaagtcataccgctatatggcttgcagg
tttggaaaagtcgaggaccagaaagacaacatgaggctctacaccgtccagatcccccac
aaacgagacagaaaacctccacaatgctacctctctaaatgggacggccagaacttccta
cccatgctgacgaatccctgcggcactgaggtcatctccaccctggctgtcagtgactct
ggaacctttcttggccttgggacagtgacgggatcagtagcaatctatattgccttttca
ctacagaagttgtactatgtgcaggagtcccacggcattgtggtgaccgatctggccttc
ctgcctgacactcccaaaggccagagcctcaaagggaacaacgaggcagccatgttgagt
gtggctgtggactgccgctgtcagatgcacactgtacgcaaccgaagatccttccctatc
tggctggtgctgttcttctgtggcctcatggtggtgggagctgtcctgctcctgcagcac
ctcttcccaggattcatttag
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