Oncorhynchus tshawytscha (Chinook salmon): 112234036
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Entry
112234036 CDS
T05605
Symbol
ppfia3
Name
(RefSeq) liprin-alpha-3 isoform X1
KO
K26226
liprin-alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112234036 (ppfia3)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112234036 (ppfia3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF745
Tc-38
Motif
Other DBs
NCBI-GeneID:
112234036
NCBI-ProteinID:
XP_042171445
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
MMCEVMPTISEDGRGGSGGGPSSPGGSGGGMGGGMGGGYGGRGEPRGGGDEGGSTGNLES
LMVNMLTERERLLDSLRETQDSLGTAQLRLRDLGHEKDSLSRQLSIALPQEFAVLTKELN
VCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEV
EVLKALKSLFEHHKALDEKVRERLRVALERVTVLEEELESSSNECHSLRDQIKRRQQGLE
NGKERLPNGPSSILEDGEIDRERQRETEIERQRAELAQLKERLALMCRQVGEIEEQLTAA
RREVTKSEEANQKLQRDVKEALCQREDMEERITTLERRYLSAQREATSLHDIKDRLENDL
ASKDSLYRQSEEKNRQLQERLDDAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEERHG
NFEERLRQMEAQLEEKNQELQRARQRERMNDEHNKRLSDTVDKLLSESNERLQLHLKERM
AALEDKNALSEELSNMKKIQDDLLANKDQLIAELERIQLELDQLRLRPGGSCYSRSLPGS
ALELRYSHGDGSLPTGSTAHLDHYGNSNTVAVVRRTHRGRWSTAREDTSKYGDWDSGSAL
LRTGFEGGVDHGCSDDEDDRETLFGSELLSPSGQTDVQTLAIMLQEQLEAINKEIKLIQE
EKESTELRAEEIESRVSSVALDGSPIPPSSLGRDSMGRGFIPQSLTSSTLASPSPPSSGV
STPRLSHSPHRETDRQNNKEDDRSLALLDSTPPPTPRALRLDRMTLTHPGAMMDDPREFR
SLSADGSSSNSSQDSLHKASKKKSIKSSIGRLFGKKEKGRMGPAGRESASLASTPSEDLG
TGDSMGLTKGSMTGTVDNRRSKRKHELLEEACRQGLPFASWDGPTVVSWLELWVGMPAWY
VAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPASNRSST
SNVWMTHAEMESLNAATKPELKEISWDQILAYGDMNHEWVGNDWLPSLGLPQYRSYFMES
LVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERRREDSQHQNKD
VMVWSNERVMCWVQNIGLKEYADNLTESGVHGALLALDDTFDYTDLALLLQIPNQNTQAR
QLLEKEYNSLISMGTERRPDEDGTKTFTRSPSWRKMFREKDLRGVTSDSSENLPANFRAS
AISTPSVTLRKVQSDVNSGPRGEVASVRTYSC
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatctctgaggatgggcgtggcgggagtgggggaggg
ccttcctctccgggagggagtggcgggggaatgggaggcggtatggggggtggatacggg
ggcagaggggagccccggggcggaggtgacgaggggggcagcaccgggaatctggaatct
ctgatggtgaacatgctgacggagagggagaggctgttggacagcctaagggagacccag
gacagtctggggacagcccagcttcgtctccgagacctgggccatgagaaggactccctc
tcaagacagctgtctatcgccctaccacaggagtttgcagtgctgaccaaagagctgaat
gtctgccgggagcagctgctggagagagaggaggagatagcagaactcaaggcagagagg
aacaacacacggctgctgctagagcatctggagtgcctggtgtctcgtcatgagcgcagt
ctgaggatgacagtggtgaagaggcaggcccagtctcctgccggggtctccagcgaggtg
gaggtcctcaaggccctcaagtccctgttcgaacaccacaaagccctggacgagaaggtg
cgagagaggttacgtgtggctctggagcgagtgactgttttagaggaagagctggagtcc
tcctcaaatgagtgccattctctacgagaccaaatcaaaagacgccaacaaggcttagaa
aatgggaaagagcggctgcccaatggaccctcctccatcctggaggatggagagattgac
agagagagacagagagaaacagagatagagcggcagagagcagagctggcccagctgaaa
gaaagactggccctcatgtgcagacaggttggggagatcgaggaacagttgactgcagct
aggagggaggtgaccaagtcagaggaagccaatcagaaactgcagagggatgtgaaggag
gctctttgtcagagagaggacatggaggagagaataactactttagaacgcaggtaccta
agtgcccagagggaggcgacgtctctccacgacattaaagacaggctggagaatgacctg
gccagtaaagactccctctacaggcagagtgaggagaagaacaggcagctccaggagcgt
ctagacgatgccaagcagaagctgcagcagaccctgcagagggccgagacgctgcctgag
atagaggcccagctcgcccagagagtggctgcactcaacaaggctgaggagcgtcatggt
aactttgaggagcgactgcgacagatggaggcgcaactagaggagaagaatcaggagtta
cagagggcgaggcagagggagaggatgaatgatgaacacaacaagcgtctgtctgacacg
gtggacaagctgctgtctgagtctaacgaaaggcttcagctccatctcaaggagaggatg
gctgctctggaggacaagaatgctctctctgaggaactttctaacatgaagaagatccag
gacgaccttctagcaaacaaggaccagctgatagccgagctggagaggattcagctggag
ttggaccagctcagactgagacccggcgggtcctgctattccaggtctctaccaggcagt
gctctggagctgaggtactcccacggggacggctccctccccacgggctccaccgctcac
ctggatcactacggtaactccaacacagtggctgtggtcaggcggactcatcgcgggcgc
tggagcacagcccgggaggacaccagcaagtacggggactgggacagtgggtcagcgctg
ctgaggaccgggtttgaggggggtgtggaccacggttgctctgacgatgaggacgacaga
gagacactgtttggctcggagctgctgtctcccagcggacagactgatgtccagacactg
gccatcatgctgcaggaacaactagaggcaatcaacaaggagatcaagctgatccaggaa
gagaaggagagtacagagttgcgggcagaggagattgagagcagggttagcagtgtggct
ctggacggttcccccatcccaccctcctccctggggagggacagtatgggacgcggcttc
atccctcaatcccttacctcctccaccctggcctccccttctccccccagttctggggtc
tccacccctcgcctgtcccactcccctcaccgtgagacagatagacagaacaacaaagag
gatgatcggtcccttgcccttcttgactccacccctccacccaccccccgagcgctgcga
cttgacaggatgaccctcacccacccaggggccatgatggacgaccccagggaattccgc
agtctgtcagcagacggcagcagttccaacagcagtcaggactctctccacaaagccagt
aaaaagaaaagcatcaagtcttccatcggccgcctttttgggaagaaggaaaagggaagg
atgggcccggctgggcgagagtctgcctctctggcctctacgccttctgaggacctgggt
actggggattctatgggactgaccaagggaagcatgacaggaactgttgacaaccgccgc
agcaaaaggaaacatgagctgctggaggaggcgtgtcgtcagggtcttccctttgcatcc
tgggatggacccactgtggtctcctggctagagctgtgggtgggaatgccagcatggtac
gtggcagcctgtcgtgccaacgtgaagagtggcgccatcatggccaacctgtctgacaca
gagatccagagggagattggcatcagtaaccccctgcaccgcctcaaactgagattggcc
atccaggagatggtgtccctcaccagcccatctgccccggccagcaatcgctcttcgacc
agtaacgtgtggatgacccatgctgagatggagtcgttaaacgcagccaccaaaccggag
ctgaaagagattagctgggatcagatcctggcctatggggatatgaaccatgagtgggtg
ggtaatgactggctgcccagcctgggtctgccccagtaccgctcctacttcatggagtcc
ctggtggacgcccgcatgctggaccacctgaccaagaaggagctgaggggacagctcaaa
atggtggacagcttccatagggttagtttgcattatggcataatgtgtctgaagcgcttg
aactacgaccgcaaagagctagagaggaggagagaagacagccagcaccagaacaaagat
gtgatggtgtggtccaacgagcgtgtgatgtgctgggtgcagaacatcgggctgaaggag
tacgctgacaacctgacagagagcggggtccatggggccctcctggctctggatgacacc
ttcgactacacagacttggccctgctgctgcagatacccaatcagaacacacaggccaga
caactcctagagaaggaatacaactccctcatctctatgggaacagagagaagaccagat
gaggatgggactaagacgttcacccgctccccttcctggaggaagatgttcagggagaag
gaccttaggggggtgacctcggactcatcggagaacctgcctgctaacttccgtgcctcc
gccatctccacaccctccgtgaccctgagaaaggttcagagtgacgtgaactctgggcct
cgcggtgaggtagcctcagtcaggacatactcttgctga
DBGET
integrated database retrieval system
