Oncorhynchus tshawytscha (Chinook salmon): 112234206
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Entry
112234206 CDS
T05605
Symbol
rab42b
Name
(RefSeq) ras-related protein Rab-42b
KO
K07925
Ras-related protein Rab-39B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112234206 (rab42b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112234206 (rab42b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
otw04031
]
112234206 (rab42b)
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
112234206 (rab42b)
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
112234206 (rab42b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
AAA_24
Motif
Other DBs
NCBI-GeneID:
112234206
NCBI-ProteinID:
XP_024258003
UniProt:
A0A8C8CBV5
LinkDB
All DBs
Position
LG03:29825773..29844052
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AA seq
219 aa
AA seq
DB search
MDLTLWQYQFRIIMLGDSTVGKSSLLKRYTEEMFLDCINQTVGVDFYVHFLEVEPGVRVK
LQFWDTAGQERFRSVTRSYFRNSVGGLLVFDLTNRASFEHVQEWHAEVCEHVQPHTVLFV
LVGNKNDRVAQGERVVGHNEAEKLAGQLGMPYIEASAKTGQCVTEAFELLTRRVYQGLLS
GEVQLQEGWDGVKCLAPRATLAQLQNPKINKSNNRRCCS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggacctgactctgtggcagtaccagttcaggatcatcatgttaggggactcgacagtg
ggcaagtcgtccctgctgaagcgttacacagaggagatgtttctggactgcatcaaccag
acagtaggggtggacttctacgtgcacttcctggaggtggagcctggtgttagggtcaaa
ctgcagttctgggacacagcaggccaggagaggttcaggtcagtgactcggtcctacttc
cgtaactcagtggggggcctgctggtgtttgacctgactaaccgtgcctcctttgagcat
gtgcaggagtggcacgcagaggtgtgtgaacatgtgcagccccacacggtgctgtttgta
cttgtgggaaacaagaatgaccgggtggcccagggagagcgggtggtgggccataacgag
gctgagaaactggcaggccagctggggatgccctacatcgaggcgtcagctaagactggt
cagtgtgtgacggaggctttcgagctgctgacccgccgggtgtaccagggcttgctgagt
ggggaggtgcagctacaagagggctgggacggggtgaagtgcttggctccacgtgcaacc
ttagcacagctacaaaatcccaagatcaataaatccaacaacagaaggtgctgttcctga
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integrated database retrieval system
