Oncorhynchus tshawytscha (Chinook salmon): 112234213
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Entry
112234213 CDS
T05605
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112234213 (taf12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112234213 (taf12)
03036 Chromosome and associated proteins [BR:
otw03036
]
112234213 (taf12)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112234213 (taf12)
Coactivators
SAGA/TFTC/STAGA complex
112234213 (taf12)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
112234213 (taf12)
STAGA complex
112234213 (taf12)
TFTC complex
112234213 (taf12)
SAGA complex
112234213 (taf12)
SLIK complex
112234213 (taf12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
TFIID-31kDa
TAF4
CENP-T_C
Motif
Other DBs
NCBI-GeneID:
112234213
NCBI-ProteinID:
XP_024258016
LinkDB
All DBs
Position
LG03:complement(29844054..29849650)
Genome browser
AA seq
162 aa
AA seq
DB search
MTQYQPQSNRSNFFTVKAEASSTPPLVTSMANSSAAAPGKVMSTPGPAGRISPEGSQVLS
KKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIDSVVTAACQLARHRKSNTLEVKDVQLH
LERQWNMWIPGYGSDEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtaccaaccacagtccaaccgttccaacttcttcaccgtgaaagccgaggcc
tcctcaacaccacctctcgtcaccagcatggccaatagcagcgccgccgctccagggaag
gtgatgagcacacctggccctgccggcagaatcagcccagaaggaagtcaggtgttgagt
aaaaagaagctgcaggacctagtaagagagattgaccccaatgagcagctcgatgaggat
gtggaggagatgctgctgcagattgcagatgactttattgacagtgtggtgacggctgcc
tgtcagctggcccgccatcgcaagtccaacaccttagaagtgaaggacgtccagctacac
ctggagcgccaatggaacatgtggattcctggctatggttcagatgagattcggccgtat
aagaaggcttgtaccacagaggcccacaaacagagaatggcattgatccgcaaaacaacc
aaaaagtag
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integrated database retrieval system