KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112234213
Entry
112234213         CDS       T05605                                 
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    112234213 (taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otw03021]
    112234213 (taf12)
   03036 Chromosome and associated proteins [BR:otw03036]
    112234213 (taf12)
Transcription machinery [BR:otw03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     112234213 (taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     112234213 (taf12)
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     112234213 (taf12)
    STAGA complex
     112234213 (taf12)
    TFTC complex
     112234213 (taf12)
    SAGA complex
     112234213 (taf12)
    SLIK complex
     112234213 (taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C
Other DBs
NCBI-GeneID: 112234213
NCBI-ProteinID: XP_024258016
LinkDB
Position
LG03:complement(29844054..29849650)
AA seq 162 aa
MTQYQPQSNRSNFFTVKAEASSTPPLVTSMANSSAAAPGKVMSTPGPAGRISPEGSQVLS
KKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIDSVVTAACQLARHRKSNTLEVKDVQLH
LERQWNMWIPGYGSDEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 489 nt   +upstreamnt  +downstreamnt
atgacccagtaccaaccacagtccaaccgttccaacttcttcaccgtgaaagccgaggcc
tcctcaacaccacctctcgtcaccagcatggccaatagcagcgccgccgctccagggaag
gtgatgagcacacctggccctgccggcagaatcagcccagaaggaagtcaggtgttgagt
aaaaagaagctgcaggacctagtaagagagattgaccccaatgagcagctcgatgaggat
gtggaggagatgctgctgcagattgcagatgactttattgacagtgtggtgacggctgcc
tgtcagctggcccgccatcgcaagtccaacaccttagaagtgaaggacgtccagctacac
ctggagcgccaatggaacatgtggattcctggctatggttcagatgagattcggccgtat
aagaaggcttgtaccacagaggcccacaaacagagaatggcattgatccgcaaaacaacc
aaaaagtag

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