Oncorhynchus tshawytscha (Chinook salmon): 112234324
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Entry
112234324 CDS
T05605
Name
(RefSeq) aryl hydrocarbon receptor isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112234324
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112234324
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_NPAS4
bHLH_HIF1A
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
112234324
NCBI-ProteinID:
XP_042162623
UniProt:
A0AAZ3NVX3
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Position
LG26:44552234..44639066
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AA seq
1064 aa
AA seq
DB search
MLSNTGVYAVKKRKKPVQKTKKSPAPDVVKSNPSKRHRDRLNGELDRLTGLLPFPEDVRS
RLDKLSVLRISVGYLKVKSFFKATMKKSSVLFPGGDGLNVNGMNAPTFSEGDLLLQALNG
FVLVVTAEGHVFYSSPTIQDYLGFHQSDVVHQSVFELIHTDDRATFRRQLHFALNPKPFD
PEQGGDGMASSSDITRNIVTYNPEQLPPENSSFLERNFVCRFRCLLDNSSGFLALNFQGR
LKFLHCQSMLGDDGTHSQPRLGLFTIATPVHTPSILEIRNKTIFFQTKHKLDFTPTGVDA
RGKVVLGYSEIELCMRGSGYQFIHAADMMYCADSHVRMIKTGESGLTTFRLLQKTGCWVW
VQANARLVYKGGRPDFIIARQRALLNSEGEENLRQRKMQLPFSFTTGEALLYETGPTLDA
TEFQTNPPKICKVESLDPQSLLGSLLKQDETVYTQPQEPQLPIDQVFMDSRALTNVACNS
WQSSMEPQGPDGVDDGDSPREVKHEGALVAMIDALEKMAQDGDLCAALQGMDVGTAELME
WESTLLRLSQNSNGTGSGDTSLELDDIMTNDIFSYVEEALFKESSEGSGNQPNCSTMVNN
DPNLFTGVLDNNNQGGPFTGVVSPTTGAGQCKPGLLDKFSFVQNGSPVNDRNGISHSQVT
GNRVVGLAGQNQAGPQQLFKSTQRLSHFGPQIPQTGLNIPILQQLQLNDIFTPSLELPEL
SNPHSSGQNESVTLSTSMAGSCAQAPNNHMGSPQIIAGQVQSNQPPPQCFPHNGLPAAMA
PNGPEEISVPQSNHLPPILVDAWASLIPSNGFVSPQIACSAPFQSLKTQKVQQWPQNQQH
QLPPPASTMKNGHQFIPDCHSQATETQRVPLTGLWPQNTNGLYHQPQQGRLANGQPAPSG
SCMFENVSPPLPNRNSHVDGTILPPPLSVCQGRMVDPQDQSYLQWGPSEPVVDTSAIIQD
NTGISFPARPLVANITTPESLLAMQQYLSGRNRVGQTQIPSLCVVDSNGTFSSSPLVNGT
FSSSPLVNGTFSSPPLVNGTFSSAPLVNGTMCFTDHNQTNYCDF
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtaacactggagtctatgctgtcaagaagcggaagaagcccgttcaaaaaacc
aagaaatctcctgctccagatgtggtcaagtcgaacccatccaaacgccaccgggatcgg
ctgaatggggagctggacaggctgacaggcctcctaccattccctgaggatgtgcgctct
cgcctggacaaactctctgtgctccgcatcagcgtcggctacctgaaggtgaagagcttc
ttcaaagcaaccatgaagaaaagcagtgtcctgtttcctgggggggatggcctgaacgtg
aatgggatgaatgccccaaccttctccgagggggacctacttctccaggctctgaatggc
tttgtgctggtggtcacagctgagggacatgtgttctattcctctcctactatccaagac
tacctgggcttccatcagtcagacgtggtccaccagagtgtgtttgagctgatccacaca
gacgacagagccacgttcagacgacagcttcactttgccctcaaccccaagccctttgac
ccagagcagggaggagacggcatggcgagcagcagtgacatcaccaggaacatcgtgacc
tataaccctgagcagctcccaccagagaactcctccttcctggagaggaacttcgtgtgt
cgcttccgctgcctcctggacaactcctctggcttcctggctctgaacttccaggggcgt
ttgaagttcctccattgccagagcatgctgggggatgacgggacgcacagccagcccagg
ttgggcctgttcaccatcgccacccctgtccacaccccgtccatattggagatcagaaac
aagacgatcttcttccagaccaaacacaagcttgacttcaccccgacgggtgtcgatgcc
agggggaaggttgtcctgggatactcagagattgagttgtgtatgagaggctctgggtat
cagttcatccacgcagctgatatgatgtactgtgcagatagccatgtcagaatgattaag
acaggagagagtggtctgaccacgttcagactgctgcagaagactgggtgctgggtctgg
gtccaggccaatgccaggcttgtctacaaaggaggaagacccgacttcatcatcgcacgc
cagagagctttacttaattctgagggagaggagaatctacgccagaggaagatgcagctg
cccttcagcttcaccaccggggaggccctgctgtacgagaccggccccaccctggatgcc
acagagttccaaaccaaccccccaaaaatctgcaaggtggagtctctggacccccagtct
ctactgggctctttactaaagcaggacgaaaccgtctacacccagccccaggagcctcag
ctacccatagaccaggtattcatggacagccgagcgctcaccaacgtggcctgtaactcc
tggcagagtagcatggagccccaggggcccgacggggttgatgatggtgatagccccagg
gaggtcaagcacgagggggcgttggtagccatgatcgatgccctggaaaagatggcgcag
gatggggacctgtgtgcggctctgcaggggatggacgtgggtacggcggagctgatggag
tgggagagcaccctcctcaggctgagccagaactctaatgggaccgggagcggggacacc
tccctagagctggatgacatcatgaccaacgacatcttctcttacgtggaggaagccttg
ttcaaggagagcagcgaggggagcggtaaccagcccaactgctccaccatggtcaacaac
gaccctaacctgttcacaggggtgctcgacaacaacaaccagggtggaccatttacagga
gtggtcagccctactacaggtgccggacagtgcaagcccgggttgcttgacaaattcagc
tttgtccaaaatggctccccagtgaacgatcgaaatggtatcagccacagtcaggtaaca
ggcaacagagtagttggtttggcaggacagaaccaggcaggaccacagcagttgttcaag
agcacccagaggctctcccacttcggcccccagattcctcagacgggcctgaatatcccc
atcctgcagcagctacagctcaacgacatcttcaccccctctctggagctccccgagctc
agtaacccacatagctcaggccagaatgagtctgtcacgttaagcactagcatggctgga
tcctgtgctcaggcaccaaacaaccacatgggaagccctcagatcatcgctggccaggtc
caatctaaccagccacctccacagtgtttccctcataatggcttgccagctgcaatggca
ccaaacggaccagaggagatctctgttccacagtccaaccatctaccacctattctggtg
gatgcttgggcatctttgattcccagtaatggctttgtttcaccccagattgcctgcagt
gcaccatttcagtcactaaaaacccagaaagtgcagcagtggccccagaaccagcagcat
cagctaccaccacccgccagcacaatgaaaaatggacaccaattcatcccagactgtcac
agtcaagccacagagacccaaagagtccctctcacaggcctttggccacagaacaccaac
ggattgtaccaccaaccccagcaggggcgattggccaacggccagcctgctccatccggc
agctgtatgtttgagaacgtctcaccccccctccccaacagaaacagccacgtggatggc
accattctgcctccccccttgtctgtatgccaggggaggatggtggacccccaggaccag
agctacttgcagtggggccccagtgagccggtggtggacacgtcagccatcatccaggac
aacaccggaatcagcttcccggctcgcccgcttgtggccaacatcaccacccccgagagc
ctactggccatgcagcagtacctttctggacgcaacagagtcggacagacacagatccca
agcctctgtgtagtagacagcaatggaacattctcctcatccccacttgtcaatggaaca
ttctcctcatccccacttgtcaatggaacattctcctcacccccacttgtcaatggaaca
ttctcctcagccccacttgtcaatggaaccatgtgctttacagaccacaaccaaaccaac
tattgtgacttctaa
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integrated database retrieval system
