Oncorhynchus tshawytscha (Chinook salmon): 112234504
Help
Entry
112234504 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: HMG box-containing protein 4-like
KO
K11298
HMG domain-containing protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112234504
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
112234504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4171
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
112234504
NCBI-ProteinID:
XP_042183566
LinkDB
All DBs
Position
LG09:complement(81222535..81228495)
Genome browser
AA seq
617 aa
AA seq
DB search
MAFEEIKKKGVVEVGMEGEVGLVAGRSQREKRRSYKDLLREEEEIAAQVRKSSKKRPKDS
ELFLLGGDSHKKKKKHSEDYYYRDQQGSGPPPHKKKRKSSDHSPSLSSSSSSHPTDTAMG
LLQAITSPMATGSDPSPHLHKKPSYPSFSSSHSSKDRKRDGSTGGSKGSHSSHSRPMSSS
SSSKKHSSKSSSLFHGGTGTPKGDLLNIREPDGLRMKLMVSPKEKAEGEGFPFPPHSSSS
SKGGIKKDKDRDRKQLSKVPKKMQQSRDPLPVVGKEVEVEGHYGGGMGGDSSSSGGELEA
GELVIDDSYKHLSKKKKKSKKSKKKKEKEKDREKDKGGREKKHSKGSGGDXKLLERDPLR
GHTHTHGSANHSAAGGMYAMGAPIPTPILTHHHQSNEVAMMEKKKKKEEREREKHEKEKD
KPKKKNTTAYQVFCKEYRVNINAEQPGLVFGELSKRLAEVWKQLPEKDKLVWKQKAQYLQ
HKQNKAEATTVKRKSSTDGVKSKGSMKGMGLGAGLVSPNRVSVGVSLSPARVPDVDPIDA
AAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLTCLTAQIPQLNGCPR
QVLSNTLDNIAYIMPGL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggagatcaagaagaaaggagtagttgaggtagggatggaaggggaagtg
ggccttgtggctggtcgcagtcagagagagaagaggagatcatacaaggacctgctcaga
gaggaggaggagattgctgcacaggtccgcaagtcatccaagaaacggcccaaggactca
gaacttttcttattgggaggggactcccacaagaagaagaaaaagcacagtgaagactac
tattacagagatcagcaaggctcaggcccacctccccacaagaagaagcgaaagtcgtca
gaccactccccttccctgtcctcctcgtcttcctcccatcccacagacacagccatgggg
ctcctacaggccatcacctcccctatggccaccggctcagacccgagcccacacctgcac
aagaagccctcctatccctccttctcttcctcccactcctccaaagaccgcaaacgtgat
gggagcaccggaggaagcaaaggcagccactcctctcattcccgccctatgtcctcatcc
tcctcttccaaaaagcactcctccaagtcgtcgtctctgttccatggtggtaccggtacc
cctaaaggagatctcctgaacatacgtgagccggatgggctgaggatgaagctcatggtc
tcgcctaaggagaaggccgaaggagagggctttcccttccctccccactcctcctcatcc
tcaaaaggggggataaaaaaggacaaggacagagaccggaaacagctctctaaagtcccc
aagaagatgcagcagagccgagatccactgcctgttgtggggaaagaagtggaggtggag
gggcactacggtgggggtatggggggagacagctcctcctcggggggcgaactggaggca
ggagagctggtgatagacgactcgtacaagcatctgtcaaagaaaaagaagaagagcaag
aaaagcaagaagaaaaaggagaaagagaaggacagagagaaagacaaaggcgggagagag
aagaagcacagcaaaggatcaggaggtgattagaaacttttggaacgggacccattgaga
ggccacacccacacccatggctcagccaatcactctgcagctggtggaatgtatgccatg
ggggccccgatccctactcccatccttactcaccatcatcaaagtaatgaagtagcaatg
atggagaagaagaaaaagaaggaggagagggaaagggaaaagcacgagaaggagaaagat
aagcccaagaagaagaacacaacagcgtaccaggtgttctgtaaagagtacagggtcaac
atcaatgcagagcagccgggactagtgttcggggagctgagcaaaaggttggcagaggtg
tggaaacagctcccagaaaaagataaactggtgtggaagcagaaagctcagtacctgcag
cacaagcagaacaaagctgaggccaccacagtcaaacgcaagagctccacagatggtgtc
aaaagcaaaggctctatgaagggcatggggctgggagcagggctggtgtcccccaaccgg
gtgtctgtgggtgtgtccctgtcaccagcacgggtccctgatgtcgaccccatcgatgcg
gccgcccacctgcaactactgggagagtccctgtccctcatcggccaccgattacaggag
acagaggggatggtggcagtgtcaggcagtctctctgtactgctggactccatcttgtgt
gccctgggacccctgacctgcctcacagcacagatcccccagctcaacggatgtccccgc
caagtcttgtccaacacattggacaacattgcctacatcatgccagggctgtga
DBGET
integrated database retrieval system
