Oncorhynchus tshawytscha (Chinook salmon): 112234539
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Entry
112234539 CDS
T05605
Name
(RefSeq) CCN family member 1-like isoform X1
KO
K06829
insulin-like growth factor-binding protein 10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112234539
Membrane trafficking [BR:
otw04131
]
Endocytosis
Others
Insulin-like growth factor-binding proteins
112234539
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_CCN
Cys_knot
IGFBP
VWC
Motif
Other DBs
NCBI-GeneID:
112234539
NCBI-ProteinID:
XP_024258472
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All DBs
Position
LG09:complement(80702688..80714104)
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AA seq
446 aa
AA seq
DB search
MNRLKCVGVNILGRTLHINFGITAPCLTVPVVGFCTWTKTTIIFLWQKLYFLYFFIQLSF
DNMRTLILLVLFQMTTVALVRAGCPVMCECPAGPPSCPPGVSSVPGGCGCCKVCAAQLNQ
DCHDSHPCDHHKGLECNYGNDVGHTHGICRAKLEGRPCEYSGRIYQNGENFRAGCKHQCT
CIDGAVGCVPLCPSHVPLASPSCPAPRMVKVPGQCCLSIDCHKGSSVVPPVHGHPLPPAY
LPFPFMPYPAYPYKPYHYKPKDTMGNELVEVEKTWDKLRGHKHLAAWRQFGGQCVVQTTS
WSQCSRSCGMAVSSRVTNDNAQCKLVKETRLCNIRPCSSMSIPIKKGRKCSRTHKAAEPL
RLSYAGCRSTRLYRPNYCGVCVDGRCCSPRRTRTASVTFACPDGERFDHSVMFVQSCKCS
DKCSHLNEVALPPQQWLYGDTHKFSD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgattaaaatgtgtcggtgttaatattctaggaagaacactacatattaacttt
ggaattactgcgccttgtttgacagttcccgttgtggggttttgtacgtggacgaaaaca
acaattatcttcttgtggcagaagttatattttctttattttttcattcaattgtcattt
gacaacatgaggacgttaatattgcttgttctgtttcaaatgacgactgttgccttggtg
agagctggctgccctgtgatgtgtgagtgcccggcaggacccccctcctgtcccccgggg
gtcagctctgtacctggcggctgtggctgctgtaaggtgtgtgctgcccagctcaaccag
gactgccacgactcacacccctgtgaccaccacaaggggctggagtgtaactatggcaat
gacgtgggccacactcatggcatctgcagggcgaagctcgagggtcgcccctgcgaatac
agcggacggatctaccagaacggggagaatttccgggctggctgcaagcaccagtgtacg
tgcattgacggggcggtgggctgcgtgcctctgtgccccagccacgtgcctctggcatca
ccctcctgccctgcccctcgcatggtcaaggtgcctgggcagtgctgcctcagtatcgac
tgccacaagggctcatccgttgtgcccccagtacacgggcacccactgcctccagcctac
ctgcctttccccttcatgccctaccctgcctacccctacaaaccataccactacaaaccc
aaggataccatgggaaacgagctggtggaggtagagaagacgtgggacaagctgcgcggg
cacaagcacctggcggcatggaggcagtttggagggcagtgtgtggtccagaccacgagc
tggtcccaatgctcacgcagctgtgggatggccgtgtcctctcgtgtcaccaatgacaac
gcccagtgtaagctagtgaaggagacgcgtctgtgcaacatccggccctgcagctccatg
tccatccccatcaagaaagggaggaagtgctcccgtacccacaaggcagcagagcccctg
cgtctgtcctatgctggctgccgcagcacgcgtctctaccggcccaactactgcggcgtg
tgtgtggacggccgctgctgctcgccccgccgcacacgaactgcctctgtgacctttgcc
tgccctgatggcgagcgcttcgaccactccgtcatgtttgtgcagtcctgcaagtgcagt
gataagtgcagtcatctgaacgaggttgccctcccgccccagcagtggctctacggagac
acacacaagttctccgactag
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