Oncorhynchus tshawytscha (Chinook salmon): 112234592
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Entry
112234592 CDS
T05605
Name
(RefSeq) HMG box-containing protein 4-like isoform X1
KO
K11298
HMG domain-containing protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112234592
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
112234592
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4171
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
112234592
NCBI-ProteinID:
XP_042158200
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All DBs
Position
LG20:complement(17397465..17403416)
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AA seq
637 aa
AA seq
DB search
MLGVRETSKPVEEKREIMAFEEIKKKGVVEVGMEGEVGLVAGRSQREKRRSYKDLLREEE
EIAAQVRKSSKKRPKDSEPFLLGGDSHKKKKKHSEDYYYRDQQGSGPPPHKKKRKSSDHS
PSLSSSSSSHPTDTAMGLLQAITSPMATGSDPSPHLHKKPSYPSFSSSHFSKDRKRDGST
GGSKGSHSSHSRPMSSSSSSKKHSSKSSSLFHGGTGTPKGDLLNIREPDGLRMKLMVSPK
EKAEGEGFPFPPHSSSSSKGGIKKEKDRDRKQLSKVPKKMQQSRDPLPVVGKEVEVEGKK
AFGYERHGHYGVGMGGDSSSSGGELEAGELVIDDSYKHLSKKKKKSKKSKKKKEKEKDRE
KDKGGREKKHSKGSGGDPLRGHTHTHGSANHSAAGGMYAMGAPIPTPILTHHHQSNEVAM
MEKKKKKEEREREKHEKEKDKPKKKNTTAYQVFCKEYRVNINAEQPGLVFGELSKKLAEV
WKQLPEKDKLVWKQKAQYLQHKQNKAEATTVKRKSSTDGVKSKGSMKGMGLGAGLVSPNR
ASVGVSLSPARVPDVDPIDAAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILC
ALGPLTCLTAQIPQLNGCPRQVLSNTLDNIAYIMPGL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttgggagttagagagacgagcaagcctgttgaggagaaaagagagatcatggctttt
gaggagatcaagaagaaaggagtagttgaggtagggatggaaggggaagtgggccttgtg
gctggtcgcagtcagagagagaagaggagatcatacaaggatctgctcagagaggaggag
gagattgctgcacaggttcgcaagtcctccaagaaacggcccaaggactcagaacctttc
ttattgggaggggactctcacaagaagaagaaaaagcacagtgaagactactattacaga
gaccagcaaggctcaggcccacctccccacaagaagaagcgaaagtcgtcagaccactcc
ccttccctgtcctcctcgtcttcctcccatcccacagacacagccatggggctcctacag
gccatcacctccccaatggccaccggctcagacccgagcccacacctgcacaagaagccc
tcctacccttccttctcttcctcccacttctccaaagaccgcaaacgtgatgggagcacc
ggaggaagcaaaggcagccactcctctcattcccgccctatgtcctcatcctcctcttcc
aaaaagcactcctccaagtcgtcgtctctgtttcatggtggtaccggtacccctaaagga
gatctcctgaacatacgtgagccggatgggctgaggatgaagctcatggtctcgcctaag
gagaaggccgaaggagagggctttcccttccctccccactcctcctcatcctcaaaaggg
gggataaaaaaggagaaggacagagaccggaagcagctctctaaagtccccaagaagatg
cagcagagccgagatccactgcctgttgtggggaaagaagtggaggtggagggtaagaag
gcctttggctatgagagacatgggcactacggtgtgggtatggggggagacagctcctcc
tcggggggcgaactggaggcaggagagctggtgatagacgactcgtacaagcatctgtca
aagaaaaagaagaagagcaagaaaagcaagaagaaaaaggagaaagagaaggacagagag
aaagacaaaggcgggagagagaagaagcacagcaaaggatcaggaggggacccattgaga
ggccacacccacacccatggctcagccaatcactctgcagctggtggaatgtatgccatg
ggggccccgatccctactcccatccttactcaccatcatcaaagtaatgaagtagcaatg
atggagaagaagaaaaagaaggaggagagggaaagggaaaagcacgagaaggagaaagat
aagcccaagaagaagaacacaacagcgtaccaggtgttctgtaaagagtacagggtcaac
atcaatgcagagcagccgggactagtgtttggggagctgagcaaaaagttggcagaggtg
tggaaacagctcccagaaaaagacaaactggtgtggaagcagaaagctcagtacctgcag
cacaagcagaacaaagctgaggccaccacagtcaaacgcaagagctccacagatggggtc
aaaagcaaaggctctatgaagggcatggggctgggagcagggctggtgtcccccaaccgg
gcgtctgtgggtgtgtccctgtcaccagcacgggtccctgatgtcgaccccattgatgcg
gccgctcacctgcaactactgggagagtccctgtccctcatcggccaccgattacaggag
acagaggggatggtggcggtgtcaggcagtctctctgtactgctggactccatcttgtgt
gccctgggacccctgacctgcctcacagcacagatcccccagctcaacggatgtccccgc
caagtcttgtccaacacattggacaacattgcctacatcatgccagggctgtga
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