Oncorhynchus tshawytscha (Chinook salmon): 112234607
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Entry
112234607 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
otw04137
Mitophagy - animal
otw04144
Endocytosis
otw04340
Hedgehog signaling pathway
otw04350
TGF-beta signaling pathway
otw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112234607
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112234607
04350 TGF-beta signaling pathway
112234607
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112234607
04137 Mitophagy - animal
112234607
09144 Cellular community - eukaryotes
04520 Adherens junction
112234607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112234607
04121 Ubiquitin system [BR:
otw04121
]
112234607
03029 Mitochondrial biogenesis [BR:
otw03029
]
112234607
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112234607
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
112234607
Autophagy
Mitophagy
Other mitophagy associated proteins
112234607
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
HECT type E3
112234607
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112234607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
112234607
NCBI-ProteinID:
XP_042163460
LinkDB
All DBs
Position
LG27:15641585..15702134
Genome browser
AA seq
772 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDMNKL
GLNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPILSTNGATPTIPCVPSSDQRAQERRVRSQ
RHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEEL
GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRSGIEIQNSPI
SRQIQLKEQAQQALVSPGNLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIE
VSREEIFEESYRQVMKMRPKDLWKRLMVKFKGEEGLDYGGVAREWLYLLSHEMLNPYYGL
FQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKP
ITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKIIQVTQD
TKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVISQHLLKAFDEKELELIVCGLGKIDIND
WKSNTRLKHCTPDTNIVKWFWKAVESYDEERRARLLQFVTGSSRVPLQGFKALQGAAGPR
LFTIHQIDASSNNLPKAHTCFNRIDIPPYENYDKLYDKLLTAIEETCGFAVE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttcggcgaaatggtccggttaaactgcgtttaacagtcctctgc
gccaaaaacctggtgaagaaagatttctttcgcctccccgatccctttgccaaagtggtg
gtggacggctcaggacaatgtcactccacagacaccgtgaagaacaccctcgaccccaag
tggaaccagcactacgacctatatattggaaagtctgactccatcaccatcagcgtgtgg
aaccacaagaagatccataagaagcagggggctggcttcctgggctgtgtacgccttcta
tccaatgccatcaaccgcctcaaagacaccggctatcagagattggacatgaacaagctg
ggcctcaatgacagtgacacagtgaggggtcagatagtggtgagcctgcagtccagagac
aggataggcacaggaggcccagtggtggactgcagccgtctgtttgacaatgatctgcca
gacggctgggaggagcggaggactgcgtctggccgaatccagtacttgaaccacatcaca
cgcaccacacagtgggagaggcctaccaggcctgcgtcggagtactccagcccaggccgg
cctctcagctgcatcgtggatgagaacacgcccatcctgagcaccaacggggccacgccc
accattccatgtgtcccgtccagcgaccagcgggcccaggagagacgcgtccgctcccag
agacacaggaactacatgagcaggacacacctccacacacccccagacctgcccgaggga
tacgagcagaggaccacgcagcagggccaggtctacttcctccacacccagacaggagtc
agcacatggcacgaccctcgagtgcccagagacctgagtaatgtaaactgtgaggagctg
ggcccactgccccctggctgggagatcaggaacacagccaccggccgggtctactttgtg
gaccataacaaccgcaccacgcagttcacagacccgcgcctctccgccaacctgcatcta
gtccttaacccaagccccaatggttcccgcagcggcatcgaaattcagaacagtccgatc
agccgtcagatccagctgaaggagcaggcccagcaggcactagtgtctccaggtaatctg
ccagaggaggccgagtgcctcacggtgcccaagtacaagagggacctggtgcagaagctg
aagatcctccgccaggagctgtcccagcagcagccccaggcaggccactgtcgcatagag
gtgtcccgcgaggagatctttgaggagtcttaccgccaggtgatgaagatgaggccgaag
gacctgtggaagagactgatggtgaagtttaaaggggaggaggggctggactacggagga
gtggccagggagtggctgtatctgctgtcccatgagatgctgaatccgtactacggcctg
ttccagtactcccgcgatgacatctacaccctgcagattaaccctgactcagccgtcaac
ccggagcacctgtcctacttccactttgtgggtcgtattatgggcatggcggtgttccac
ggccactacatagacgggggcttcaccctgcccttctacaaacagctgctggggaaaccc
atcaccctggacgacatggagtcagtggacccagacctccacaacagcctggtctggatc
ctggacaatgacatcacaggcgtgttggaccacaccttctgtgtggagcacaatgcctac
ggggagatcatccagcacgaactcaaacccaacggcaaaatcatccaggtcacccaggac
accaagaaggagtatgtcaggctgtatgtgaattggcgtttcctgcgaggcatcgaggct
cagttcctggccctgcagaagggcttcaacgaggtcatctcacagcacctcctcaaggcc
ttcgacgagaaagagctggagctcatagtgtgtggactgggtaagatcgacatcaacgac
tggaagtccaacacgcggctgaagcactgcacccctgacaccaacatcgtcaagtggttc
tggaaggctgtggagtcgtacgatgaggagcgccgggccaggttgctgcagtttgtcacc
ggctcctccagggtccccctgcaaggcttcaaagccctccaaggtgctgcaggcccacga
ctcttcaccatccaccagatcgatgccagctccaacaacctgcccaaagcccacacctgc
ttcaaccggatcgacattcctccctacgagaactatgacaagctgtatgacaagctgctc
actgctatcgaggagacgtgtggctttgctgtggagtga
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