Oncorhynchus tshawytscha (Chinook salmon): 112234631
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Entry
112234631 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43-like
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112234631
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112234631
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112234631
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112234631
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112234631
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
112234631
NCBI-ProteinID:
XP_042183572
UniProt:
A0AAZ3Q0E9
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Position
LG09:81520045..81630019
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AA seq
1231 aa
AA seq
DB search
MDEHYRVKDEATSKAAKRKENKQKHGRLFRKKSLKSVGSFVNKIIKTLGTFTHFGDVAVQ
GAEDDDGGFRDGTPCNTSTNSENIKEDVQVAGDDSVKNNSIVSSRCSVKERVLWCYGGKI
PGVLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLERYKLDLSRRRINGIVKSEDTQHARG
EVTEQLASLVRALWTLEYIPQLSVEFKSIVSKYGSQFRGNSQHDALEFLLWLLDRVHEDV
NLSSCSNNNNKTKAPGKGPGISEKAMVTETPHSQQPGARHSFVQEHFQAQYKSSLTCPHC
HKQSNTFDPFLCISLPIPLRHTRSLCVTLVFSTKGQRYLRIGLAVPLFGSLAFLRRMLAD
EGKISPDQVILTEIYTTGFQRSFFDEEDLTCIAETDIIYAFQAPPLYIRGGSALLSGYHH
SLPSSPYSSGPEGQRLPPSGTLSSEFLNHGVPVKILLLVCNAAWNAQQAVRFGPPFLMRE
DRSTSWDQLQQSILSKLYYLMINGAQAQNARVLFKIRVVGGSASYSYLSPQDGRPLYHPA
VNRALNLCGSGGPPHVKLIIEWEHRIKDCLFGNIQEEVVKDAESVRGQHQQHVQQHSCTL
DECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNKL
ATLVRFPLDGLDMAPHVVKRSQSTRLPPQCPLPPHDGPLLPGPLHPAWKQPCPPDVAPPD
FLYDLYAVCNHHGGMHGGHYTAFCRNSLDAQWYGYDDSSAEPVTEGEVCTRGAYILFYQR
RNTIPPWSASSSLRGSTSSSTSDHWLIRLTRDSKRGSLFSGGSTSGPPGPTPTPESPELP
VFEDEPLKTETDGFENKPFVRGTQGRSVSMRSPTKTKDTLSKVLPLRWSFGSKDHPKPSA
PRRGELVEYLESGRRPRCTKDPIITLVATPPQGGHRDLGSSPSVSSLSCMDRSNSEACDS
PRVPEGQSRPAIERSSSLGLSIITKVRDDSSLGRRSSKRFRQDQGRTLDPHPHRGSTDGV
HISHSAPPSRDSTLKRPKAQAGLTSRVGVLQAGLQPEERKGMRGQEVRSHDSLLSFFKSG
FLKKDTQMTPSKGEVVRANGHGRTSKVANGSLSKLSLSNGTLNGVALEEKRANGAPRSDC
RHSKGQLVNGRAGSHSSAADIKRAHSSSNIQTKLDLTLRRCASLQRNGQVAPPAPRSSLA
TEKPSYATLQRARYSTTSLGRQQRPVPESCF
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacactacagagtgaaggatgaagccacgtcaaaggcagcaaagcgcaaggaa
aacaaacagaaacatggacggctttttcgaaagaaatcattgaagtcggtggggagtttt
gtaaataaaattatcaaaactttgggcacttttacccactttggagatgttgcagttcag
ggcgcagaggatgacgatggagggtttcgtgacgggacaccttgtaacaccagtaccaac
tcagaaaatatcaaagaggatgtccaggtcgccggggatgattctgttaaaaataattcg
atagtttcttcccgttgctcggtgaaagagagggttttatggtgctatggtggcaaaatt
ccaggtgttctaggcttgaaaaatcatgggaacacctgtttcatgaacgccgtggtccag
tgcttgagcaacactgacctgctcgcagagtatctcgggttggagcggtacaaattggat
ttgagtcgaaggagaattaatgggattgttaaaagtgaagacacgcagcatgccagaggt
gaagtcacggagcagttggcatcacttgttagggcactctggactctggaatacatccct
caactgtcagtggaattcaagagtatagtatccaagtatggatcccaattccgaggaaac
tcacaacatgacgccctggagttcctgctttggcttctggaccgagttcacgaagatgtc
aacttgtcctcctgcagcaacaacaataacaagaccaaagccccagggaagggccctggt
atatcagagaaggcgatggtcactgagactccccactcgcagcagcccggggcacgccac
agctttgtacaggaacacttccaggcacaatacaagtcatcgctgacctgccctcattgt
cataaacagagcaacacctttgaccctttcctctgcatttcacttcccatccctctgcgc
cacaccaggtctttgtgtgttactctggtcttcagtacgaagggccagagatacctgcgc
atcgggctggctgtgcctctctttggttcactggcctttcttagaaggatgttggcggat
gaggggaagatctccccagaccaggtgatcctgacagagatctacaccacaggctttcag
cgctccttctttgatgaggaggatctgacgtgcatagccgagactgacatcatctatgcc
ttccaggccccgcccctatacatcagaggaggctctgcactactctcagggtaccaccac
agcctgccgtcgtcgccgtactcctccgggcccgaaggtcaaaggttacctccatccgga
acgttgtcatcagagttcctgaaccatggtgtaccggtgaagatcctgttgctggtgtgc
aacgccgcctggaatgcccagcaggctgtcaggtttggaccgccgttcctgatgagggag
gaccgctccacctcctgggaccagctgcagcagagcatcctcagcaagctctactacctg
atgatcaacggagcacaggcccagaatgccagagtgctgtttaagatccgtgtggtggga
ggatcagcgtcctacagctacctctccccccaggatggacggccgctctaccacccagca
gtgaacagagctcttaatctctgtggctcaggaggaccgccccatgtgaagctcatcatc
gagtgggaacacagaatcaaagactgcctgtttgggaacatccaggaggaggtggtgaag
gatgctgagagtgtgagaggccagcatcagcagcacgtccagcagcacagttgtaccctg
gacgagtgctttcagctctacactaaagaggaacagctggccccagacgatgcatggaaa
tgtccccactgtaagcagctgcagcagggcatggtgaagatgagcctgtggacgctgcct
gacatcctcatcctccacctcaagcgcttccggcaggtgggcgagcgccgcaacaagctg
gccacgctggtgcgcttccccctggacggcctagacatggcaccccatgtggtgaagagg
agtcagagcacccggctgcccccccaatgtcctctgcccccccacgacggtcctctgctc
cctggccccctgcacccggcctggaaacagccctgcccacccgacgtggcccctccagac
ttcctatatgacctctatgccgtgtgtaaccaccacggaggcatgcacgggggacattac
acagcgttctgcaggaactcattggacgcccagtggtatgggtatgatgacagcagtgca
gagccagtcacagagggggaggtgtgtacacggggagcctacatcctcttctaccagaga
cgcaacaccatccctccatggtcagccagctcctctctcagaggctccaccagctcctcc
acgtcagaccactggctgatccgtctgacgcgggacagtaagaggggcagcctgttctct
gggggatccacctctggccctcctggccccacaccaacccccgaatccccagagctccct
gtgttcgaggacgagcctctcaaaacagaaacagatgggtttgagaataagccatttgtc
cgaggcactcagggcaggagcgtgagcatgaggtcacccactaagaccaaggacaccctg
agcaaagtgctgcccctgcgctggtcctttggttccaaggaccaccccaaaccctccgcc
cccaggcgaggggagctggtggagtacctggagtcagggcgcaggccgcggtgcaccaag
gaccccatcatcacccttgtggccaccccgccccagggcgggcacagggacctgggcagc
tcccccagtgtcagcagcctgagctgcatggacaggtccaactctgaggcctgcgactcc
ccaagagtaccagagggccagagcaggcctgccatagagaggagctccagcctggggctc
agtattatcactaaagtcagggatgacagctcacttggccggaggtcctccaagaggttc
aggcaggaccagggcaggaccctggaccctcacccccatagaggctctactgatggggtc
cacatcagccacagtgcccccccaagtagggactccacactgaagaggccaaaggcccaa
gcagggctgacctccagggtaggggtgctgcaggctggtctacagcctgaggagaggaag
gggatgaggggtcaggaggtaaggagccacgacagcctcttgtcctttttcaaatcaggc
ttcctgaagaaagacactcagatgacacctagcaagggggaggtggtccgggccaatggc
cacggacgaaccagcaaggtggcaaacggtagtttgtctaaactctccctctccaatggg
accctgaacggtgtagcgctggaggaaaagagggccaacggcgcccctagaagtgactgc
cgtcacagcaaagggcagcttgtcaacgggagggcagggagtcacagctctgctgctgac
atcaagcgtgcccacagctccagtaacatccagaccaaactggacttgactctgcgcagg
tgtgcctctctgcagaggaatgggcaggtagctcccccggccccccgcagcagcctagcc
acagagaagcccagctatgccaccctgcagcgggcacgctacagcaccacctccctgggc
aggcagcagagacccgtccccgagtcctgcttctga
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