Oncorhynchus tshawytscha (Chinook salmon): 112234670
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Entry
112234670 CDS
T05605
Name
(RefSeq) rabankyrin-5 isoform X1
KO
K20129
rabankyrin-5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112234670
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112234670
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
FYVE
BTB
BACK
Val_tRNA-synt_C
IBR
Motif
Other DBs
NCBI-GeneID:
112234670
NCBI-ProteinID:
XP_024258680
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Position
LG30:44567097..44602135
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AA seq
1171 aa
AA seq
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MHKEEEVAKLQKHLALLRQEYVKMQQKLADTERRCAVLAAQTSGQGSTNTFGTGAGDTFI
SRLLDIVAQLYQQDQYSDLKVTVGEMTLNAHKFVLAARSDAWSLANLASTSELDLSDAKP
EVAMAMLRWAYTDNLELSEDDAFLIDLMKLANRFQLQLLRERCEKGVMSSVNVRNCIRFY
QTAEELDATTLMNYCGEIIASHWDDLRKEDFSTMSAPLLYKMIKSKTEFPLHKAIKVERE
DVVFLYLIEMDSQLPGKLNELDNNGDLAMDLALSGKLESIATTLVNNKADVDMVDQSGWS
LLHKAIQRGDEFASTFLIRHSAQVNAATVGAVETPLHLVCSFSPRKHSGDVMSGMAHIAE
VLLKTGANPNMQNSKGRTPLHEAVVSGNEPVFNQLLQCKQMDLELKDHEGSTALWLALQY
ITVSSDPNVNPFEDEALVVENGTSFDENSFAAQLMQRGSNPDAPDTATENCLLQRAAGAG
NEAAALFLATHGAKVNHANKWGETPLHTACRCGLADLTAELLQQGANPNLQTQKALPDEA
QGVSLQSPLHMAIVHNHPDVVSVILEQKANALHATNNLQIIPDFSLLDSMDQTALGLALW
TGMHTIAAQLLGSGASINNTMSNGQTLLHMAIHRQDSKSALFLLEHQADINVRTQEGETA
LQLAISNQLPLVVDAICTRGADMSVVDKRGHPPLWLALENGLEDIASTLVRHGCDATSWS
SGPSGCQQTLLHRAVDENNEVTACFLIRSGCDVNSPRRPGPNGEGGEEARDGQSPLHLAG
SWGLEEVVQCLLEFGANVNTQDAEGRASIHVAISSQHSVIIQLLISHPDIRLNVRDRQGM
TPFACAMTHKNNKAAEAILKREPGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVQANVN
SRVQDAAKQTPLHLAVHAASEMIVRNLLLAGAKVNELTKHRQTALHLAAQQDLATICSVL
LENGVDFTAVDENGNNALHLAVMQGRLNNVRALLTESNIDAEAFNLRGQSPMHVLGQYGK
ENAAAIFELFLECMPEYPLDKVDNEGNTVLLLAYMKGNANLCRAIVRSGARMGLNNNQGI
NIFNYQVATKQLLFRLLDMLTKEPPWCDGSNCYECVAKFGVTTRKHHCRHCGRLLCHKCS
IKEIPIIKFDLNKPVRVCDVCFDVLTLGGVS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaggaagaggaggtggccaagctgcagaagcacctagccctgctgaggcaggag
tatgtgaagatgcagcagaagctggctgacacagagaggcgatgtgccgtgctggctgct
caaacctctggccagggctccaccaacaccttcggaaccggggcaggagacaccttcatc
agccgtctgcttgacatcgtggcccagctctaccagcaggaccagtacagtgatctgaag
gtgacggttggagagatgacactcaacgctcacaagtttgtcctggctgctcgcagtgat
gcctggagcctggccaacctggcctccacctcagaactggacctgtctgatgccaaaccg
gaggttgccatggcaatgttgcgctgggcctacacagacaacctggagctcagcgaggac
gatgccttcctcatcgacctgatgaagctggccaaccgcttccaactgcagctgcttcga
gagaggtgcgagaaaggggtgatgtcatcggtgaacgtgagaaactgtatccggttctac
cagacggccgaggagctggatgccacaaccctcatgaactactgtggagagatcatcgcc
agccactgggatgacctgaggaaagaggacttcagcactatgagtgctccactgctctac
aagatgattaagtctaaaacggagttcccacttcacaaagccatcaaggtcgagagggaa
gacgtggtcttcctctacctcattgagatggactcgcagttgcctgggaagctgaatgaa
ctggacaacaatggggacttggccatggacctggctctgtctggtaaactggagagtatc
gccacaacgctggtcaacaacaaggcagatgtggacatggtggaccagagtggttggagc
cttctgcacaaagccatccaaagaggtgacgagtttgcctccactttcctgatccgccac
tcggcccaggtgaacgcggccacggtcggcgcggtggagacccccctgcacctggtgtgt
tccttcagtcccaggaagcactctggggacgtgatgagtggcatggcccacatcgctgag
gttctgctcaagacaggggccaaccccaacatgcagaacagcaagggaagaactcctttg
catgaagcggtggtgtcggggaacgagcctgtgttcaaccagctcctgcagtgcaaacag
atggacctggagctgaaggaccatgagggtagcacagctctgtggctggccctgcagtac
atcaccgtgtcctctgaccccaacgttaaccccttcgaggacgaagctctggtggtggag
aacggaacatcgtttgatgaaaacagctttgcagcccagctcatgcagagaggcagtaac
ccagacgcaccagacaccgccacagagaactgtctactgcagagggcagcaggtgcaggc
aatgaggctgccgccctcttcctggccacacatggggcaaaggtcaaccatgccaacaaa
tggggtgaaacccctctccacacggcgtgtcgctgtggtctggcggacctgacggcagag
ctgctccaacagggggctaaccctaacctgcagacccagaaggccctccccgatgaggcc
cagggggtgtccctacagagccccctccacatggccattgtacacaaccaccctgacgtg
gtgtccgtcatcctggagcagaaagccaatgctcttcatgccaccaacaacctgcagatc
atcccagatttcagcctcctagactccatggaccagacggcgttgggtctagccctctgg
acaggtatgcacaccatagcagcccagctcctgggttctggggcatccatcaacaacacc
atgtccaacggtcagaccctgctccacatggccatccacagacaggacagcaagagtgct
ctgttccttctggaacaccaggctgacatcaacgtcaggacccaggagggagagacggcg
ctgcagctggccatcagtaatcagcttcccctggtggtggacgccatctgcacgcggggg
gcggacatgtccgtggtggacaagagggggcacccccctctgtggctggccctggagaat
ggcctagaggacatcgcctccacgctggtccgacacggttgtgacgccaccagttggagc
tctggtccctcaggctgtcagcagactctcctccacagggctgtggatgagaacaacgag
gtcaccgcctgtttcctcatccgcagtggttgtgatgtgaacagcccgcggcggccaggc
cctaacggggaggggggtgaggaggccagggacggacagtcacccctccacctggcaggc
agctgggggctggaggaggtggtacagtgccttctggagtttggagccaacgtcaacaca
caggacgcagagggccgagcttcaatccacgttgccattagcagccagcacagcgtcatc
atccagctgctcatctcccacccggacatccgtctgaacgtacgtgaccgccagggcatg
acccccttcgcctgcgccatgacccacaagaacaacaaggctgcagaggccatcctcaag
agagagcctggggctgccgaacaggtggacaacaaagggcgtaacttcctgcatgtggcg
gtgcagaactccgacatcgagagtgttctgttcctgatcagtgtccaggccaacgtgaac
tcccgtgtgcaggacgctgccaagcagacccctctacatctagctgttcacgctgcctcc
gaaatgatcgtccgtaacctgctgctggccggggccaaagtgaatgagctgaccaaacac
agacagaccgctctacacctggcagcccagcaggacctggccactatctgctctgtgctg
ctggaaaacggagtggacttcaccgctgtggacgagaatggcaacaacgctctgcacctg
gccgtaatgcagggtcggcttaacaatgtgcgagcccttctcacagagtccaacatcgac
gcagaggccttcaatctccggggccagtcaccgatgcacgtcctggggcaatatgggaaa
gagaatgcggcggccatctttgagcttttcttggagtgtatgcccgagtaccctctggac
aaagtggacaatgaagggaacaccgttctgttgttggcctacatgaagggcaatgctaac
ctgtgtcgtgccatcgtgaggtctggtgcacgtatgggcctcaacaacaaccagggaatc
aacatcttcaactaccaagttgccaccaagcaactgctcttccgcctcctagatatgttg
accaaagagcccccgtggtgtgatggatcaaactgttatgaatgtgttgccaagtttgga
gtcaccacaaggaagcatcactgccgtcattgcggccgcttgctctgccacaagtgttct
ataaaagagatccccatcattaagtttgacctgaacaagccggtgagggtctgtgatgtc
tgctttgacgtgctgactctgggtggggtgtcctaa
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