Oncorhynchus tshawytscha (Chinook salmon): 112234704
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Entry
112234704 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 9
KO
K19951
TBC1 domain family member 8/9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112234704
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112234704
Endosome - Golgi transport
Rab GTPases and associated proteins
112234704
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAM
RabGAP-TBC
EF-hand_1
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
112234704
NCBI-ProteinID:
XP_042167905
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All DBs
Position
LG34:15844721..15873174
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AA seq
1291 aa
AA seq
DB search
MWVHPEEVLQAGALWITERANPYFILQKRKGHGDGRGGLAGLLVGTLDVVLDSSARVAPY
RILYQTPDSLIYWIIAHGCSRKEITEHWEWLEQNLLQTLSIFENENDITTFVKGKVQGII
AEYNKNHDVKEDDDTDKFKEAICTFRKLFGMPEEEKLVNYYSCSYWKGRVPRQGWLYLSI
NHICFYSYLLGKEAKLVIRWADITQLEKSATLLLPDAVKVSTRVAEHVFSVFLNINETFK
ESQFNAAIXRQQIMFRIRFLTVSRLDNLLNLVVSPRDLDARAKSERYRALFRLPKDEKLD
GHTGCTLWTPFNKMHILGQMFVSTNYICFTSKEETLCSLIIPLREVTIVEKADSSNFLPS
PVSISTKNRMTFLFANLKDRDFLVQRISDFLQQTTSKIYFERETTGSVNSSDDEVYSQQG
SLLSSSPQRSSLGSEGSSEGERQFNLNDNSVPTATQALMTMYRRRSPEEFNPKLAKEFLK
EQAWKNHITEYGQGVCMYRTEKTKDLVLKGIPENMRGELWLLFSGAINEMATHPGYYEDL
VEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQVHTW
YMVHTWYIVYTHGIXYTHTDAPVLSLKIHCQIRHPSTXAGHLVDQGVFEELAREYXPQLY
DCMQDLGVISTIXLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALSVLHANIHQL
LKXKDHGEAMTVLGRYLDSVSNKDSTLPPIPHLHSLLTDDGDPHPEVDIFKLVRSSYEKF
GSIRADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIVTETAFSIDELEELYVLFKAEHLTS
CYWGGTGGSNPTERHDPSLPYLEQYRIDLEQFRGLFSLLFPWAPVNGAHADPLALRFFRL
LDHNGDSLINFREFISGLSVLCHGDLTEKLKLLYKMHVIPEVTHEQEPDSAFEATQYFFE
DITPETSNGLDPKCKSEKDDGFVRVTFKTEKVKKLHTPDYRHYLRLWNQGTKNKLDNMKD
LPKLNQSQFIELCKTLYNMFSEDAQEQELYHATATVTSLLLEMGEVGKLFCHSKDQEEQD
QDDPEEAKSSWASPRWRDQAWGCLPAEGPGRGEGGEPGPGPVALRKRDGRGEQLSAMEDI
KLEDSSPKDTGTSSSMLISDDETKDDTSMSSYSVLSGGSHELDDKLHCEDINDDTVLVRS
ENRPHGGRERASRXRWAPWXKWGGLPHSTSIDKDWAITFEQFLASVLTEQALVLYFEKPV
EVAARITNAKNVRKVGCSLLSASDYEISLSG
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgcaccctgaagaggtgttgcaggcgggtgcgttgtggataaccgagcgagca
aatccgtatttcatcctccagaaacgcaagggccacggggacggcagaggaggactagcg
ggtctgttggtgggaacactggacgtggtgctggactccagtgctcgagtggccccctac
agaatcctttaccagacacctgactccctaatctactggatcattgctcatgggtgctcc
cgtaaggagatcacagagcactgggagtggctggagcagaacctcctgcagacactgtcc
atctttgagaacgagaatgacatcactacctttgtcaagggcaaagttcagggtattatc
gccgagtacaacaagaaccacgacgtgaaggaggacgatgacactgacaaattcaaggag
gccatctgtacgttccgtaagctgtttggcatgcctgaagaggagaagctggtcaactac
tactcctgtagctactggaagggccgtgtgccccggcagggctggctctacctcagcatc
aaccacatctgcttctactcttacctgctggggaaagaagccaagctggtgatccgctgg
gccgacatcacccagctggagaaaagtgccacactcctcctccctgatgcagtcaaggtg
agcacgcgggtggctgagcacgtcttctcggtcttcctcaacatcaacgagaccttcaaa
gagtctcaatttaatgctgctatttaaagacaacagattatgttccgaattagattcttg
accgtctctagactagacaatctcttgaaccttgttgtctcacccagggacctggatgcc
agggctaagagcgagcgttaccgggccttgttccgtctgcccaaggatgagaagctggac
ggacacacgggctgcaccctttggacccccttcaacaagatgcacatcctgggccagatg
tttgtctccactaactacatctgcttcacttccaaggaggagaccctgtgcagcctcatc
atccccctgagagaggtgacgatagtggagaaggcggacagctccaactttttgcccagc
ccagtgtccatcagcaccaagaacaggatgaccttcctgttcgccaacctcaaggaccgg
gacttcctggtccagaggatctctgacttcctgcagcagaccacctccaagatctacttc
gagagggagaccaccgggagtgtgaacagctctgacgatgaagtgtactcccagcagggc
tctctcctctccagcagtccccagcgcagcagtctgggctcagagggctcctccgagggt
gagcgccagtttaacctcaatgacaacagcgtgcccaccgccacccaggccctcatgacc
atgtaccgccgccgctcgccggaggagttcaaccccaaactggccaaggagttcctgaag
gaacaggcgtggaagaaccacatcactgagtacggccagggggtgtgtatgtaccgtaca
gagaagaccaaggacctggtgcttaaaggcatcccagagaacatgaggggagagctgtgg
ctgctcttctccggggcgatcaacgagatggcgacccaccctggctactacgaggacctg
gtagagaagtctatggggaagtacaacctggccacggaggagatcgagagagacctgcac
cgctccctccctgaacacccagcattccagaacgagatggggattgctgccctacgaagg
gtccttactgcctacgccttcagaaaccccaacataggctactgccaggtacacacatgg
tatatggtacacacatggtatatagtatacacgcatggtatatagtatacacacacagac
gcaccagtcctgtcgctcaagatccactgccaaattagacatccgtccacgtaagcagga
catctggtagaccagggtgtttttgaggagctggccagggagtacngtccccaactctac
gactgcatgcaggacctgggagtcatctctaccattnntctctcctggttcctcaccctg
ttcctcagtgtcatgcccttcgagagtgccgtggtggtggtcgactgcttcttctacgag
ggcatcaaggtcatcttccagctggcgctcagcgtgctgcacgccaacatccaccaactg
ctaaaanntaaggatcatggagaggccatgaccgtgctgggaaggtacctggacagcgtg
tccaataaggacagcaccctgcctcccatcccccacctgcactccctgctgacagacgat
ggggatccccacccggaggtggacatcttcaagctggtccgcagctcctacgagaagttt
ggctccatccgggcagacgtgatcgagcagatgcgcttcaaacagaggctaagggtcatc
cagaccatcgaggacaccaccaaacgcaacgtggtcagaaccattgtcacggagactgcc
ttcagcatcgacgaactggaggagctctatgttctgttcaaggcggaacacctgaccagc
tgctattgggggggaacgggtggcagcaaccccacggagcgccacgaccccagcctgccc
tacctggagcagtaccgcatcgacctggagcagttcagggggctgttctccctgctcttc
ccctgggcccctgtcaacggggcccacgcagaccccctggccctgcgcttcttcaggctc
ctggaccataacggagactctctgattaatttccgggagtttattagtggactgagtgtt
ttatgccatggggatctgactgagaaactgaagctcctgtacaagatgcatgtgattcct
gaggtgacccatgagcaggaaccagactctgccttcgaggccacccagtacttctttgag
gacatcaccccggaaacttccaatggccttgaccccaagtgcaagagcgagaaggatgat
ggctttgtcagggtcacgttcaagactgagaaagtgaagaaactgcacacccctgactac
cgccactacctgaggctgtggaaccagggcaccaagaacaaactggacaacatgaaggat
ctgcccaaactcaaccagagccagttcatagagctgtgcaagacactgtacaacatgttc
agcgaggacgcccaggagcaggagctgtaccacgccacggccaccgtcaccagcctgctg
ctggaaatgggcgaggtgggcaagctcttctgccattccaaggaccaggaggagcaggac
caggatgatccagaggaggccaaaagcagttgggccagcccgagatggagggaccaagcc
tgggggtgtcttccagcagaggggccagggagaggggaaggaggagagccagggccaggc
cctgtggccctgcgaaagagggatggcaggggcgagcagctgtctgccatggaggacatt
aagctggaggactcgtccccgaaggacacagggacatcgtcctccatgctcatctcagat
gacgagaccaaagacgacacgtccatgtcgtcctactcggtgctcagcggcggctcccat
gagctcgacgacaagcttcactgcgaggacattaatgacgacacggtcctggtgcgcagc
gagaacaggccccatggggggagggaacgggcctcacggtgaaggtgggccccatggtag
aaatggggggggctgcctcacagcaccagcatagataaagactgggccatcacctttgag
cagttcctggcatcggtgctcactgagcaggccctggtgctttacttcgagaagccagtg
gaggtggccgcacgtatcaccaatgccaagaatgtgaggaaagtggggtgctccctactg
tccgctagcgactatgagatctccctgtctgggtaa
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